Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0608 ATGTCAGAAACTGACTTGGCAGTTATTAAACCTGAGATGATGAAGCCGTATGTATGGCTTCAGACTTCAGATGATTCAATCCAACAAGTGGAACAAGAAATTGCAATGTTTTCCCCACTGATATGTCAAGAAATAATACAAAAAGGCATGGGATCTTCCAAGAATTGTGCAATATGTCTTCCTCAACAAGTCAGTCCTGCCATGTTGAGCTTAATTCTCGACTATTGTCGTTTTCATCAAGTACCAGGCCGCTCAAACAAGGAACGTAAATCTTATGATGAGAAATTTGTTAGGATAGACACGGAGAGGCTTTGTGAGTTGACATCTGCTGCAGACAGCCTTCAGTTAAAACCTTTGGTTGATCTTACCAGTCGTGCACTTGCTCGAATAATTGAAGGGAAAACACCAGAGGAGATACGTGATATATTTCATTTGCCTGATGATCTTACAGAGGAAGAAAAGTTGGAGCCCTTGAGAAATATAACTGCCGACCCAAGGATCAGACTTTTGAACCGTTTGTATGCCAAAAAGAGAAAAGAACTAAAAGAGCGCGGAAGGTTAAAGAATGTTGAAGTTGAAGAAGAGCATGTGGATGAACGTTCTGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGGAGTTCCGCTTTTGAATTTCTTACTGGAGGCGAAGAATTTTGTCGCAGATCCAAAGGGAGTTAAAACATCAAAGAATAAAAAGAAGAACCGGAGGAAAAAAGAGCAACAGAAGAACTCTTCTCTGAAGGAGGCATCTGAAATGAACAAAAAGGAGGTAAATGGCCATGATATCAGACATCAAAGTTCTGAAGCTGAGAGAATTAGCGAGACCTCATATTTACCCTATGCAGAAGATGACACATTTTCTCCTAAGGTTGAGTTTGATGATGGTGATATAGATGATGAGATTGATCCTGCTTTAAAGGAAAAAATTGACAGGGAAGTGGAAGATTTTGCCCGCAGATTAAATTCTGACTGGCCAGAAAGAATGCAAGAACTTTTATCTTCAGGGCAAGAACGGAAGACAATGCTTTTTACTACAGATGGTTTTCTAAGGCGACAAGCTTGA 1089 0.3949 MSETDLAVIKPEMMKPYVWLQTSDDSIQQVEQEIAMFSPLICQEIIQKGMGSSKNCAICLPQQVSPAMLSLILDYCRFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRDIFHLPDDLTEEEKLEPLRNITADPRIRLLNRLYAKKRKELKERGRLKNVEVEEEHVDERSVDDLLSFINGNDGVPLLNFLLEAKNFVADPKGVKTSKNKKKNRRKKEQQKNSSLKEASEMNKKEVNGHDIRHQSSEAERISETSYLPYAEDDTFSPKVEFDDGDIDDEIDPALKEKIDREVEDFARRLNSDWPERMQELLSSGQERKTMLFTTDGFLRRQA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0608 362 MobiDBLite consensus disorder prediction 250 279 - -
Gso7g0608 362 MobiDBLite consensus disorder prediction 233 280 - -
Gso7g0608 362 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Gso7g0608 362 Gene3D Potassium Channel Kv1.1; Chain A 12 161 IPR011333 -
Gso7g0608 362 PANTHER SKP1 1 294 IPR016897 GO:0006511
Gso7g0608 362 SUPERFAMILY Skp1 dimerisation domain-like 90 159 IPR036296 GO:0006511
Gso7g0608 362 PANTHER SKP1-LIKE PROTEIN 20 1 294 - -
Gso7g0608 362 Pfam Skp1 family, tetramerisation domain 18 80 IPR016073 GO:0006511
Gso7g0608 362 SUPERFAMILY POZ domain 16 80 IPR011333 -
Gso7g0608 362 Coils Coil 238 264 - -
Gso7g0608 362 SMART skp1_3 15 116 IPR001232 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0608 Gso-Chr7 6465453 6471029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0608 - - gmx:100794666 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0608 7 6465453 6471029 Gso7g0608 7 6465453 6471029 ECH
Gso7g0608 7 6465453 6471029 Gso3g0076 3 820298 827492 GST
Gso18g1966 18 52168125 52175979 Gso7g0608 7 6465453 6471029 PCT
Gso9g2134 9 45622174 45631871 Gso7g0608 7 6465453 6471029 PCT
Gso7g0608 7 6465453 6471029 Gso18g1966 18 52168125 52175979 PCT
Gso7g0608 7 6465453 6471029 Gso9g2134 9 45622174 45631871 PCT