Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0496 ATGGCACCAAGAAACAGTCGCGGAAAGGCCAAGGGAGAGAAGAAAAAGAAGGAAGAGAAGGTTCTTCCGGTTGTCATAGACATCACTGTGAAGCTTCTCGATGAAACTCATGTTCTCAAGGGAATATCAACGGACAGAATTATAGATGTTCGTCGGCTTTTATCGGTGAATACGGAGACGTGTTATATCACAAATTTTTCCCTGTCGCATGAGGTGAGAGGGCCACGTCTGAAGGATACGGTGGACGTGTCCGCACTGAAGCCCTGCATCCTCGATTTAGTTGAAGAGGATTACGATGAAGACCGAGCAGTGGCGCACGTGCGAAGACTCCTCGATATCGTCGCCTGCACCACGAGCTTCGGTCCGCCGTCGCCGAAGAACGACTCCGGTACCGTCCAGAAATCCGGCAAGTCCGAGGCGCCGCCGTCGAAGCAATCGGCGAAAGATGCGGCGGCGGCCGACCTGGACGGCGAGATAAGCCACTCGTGCCCTAAGCTGGAGAACTTCTACGAGTTTTTCTCTCTCTCACACCTCACTGCACCAATCCAATATGTGAAGAGAGGTTCGAGGCGGCACGTGGAGGAGATATCGGAGGAGGATTATCTGTTCTCGCTGGATGTGAAGGTGTGTAACGGGAAAGTGGTGCACGTCGAGGCTTGCAGAAAGGGGTTTTACAGCGTTGGGAAGCAGCGGATACTGTGCCATAATCTGGTTGATCTGTTGAGACAGCTTAGCAGAGCTTTTGATAATGCTTTCGATGATCTCTTGAAGGCATTTTCAGAACGTAACAAGTTTGGGAATCTCCCATATGGCTTCAGAGCCAACACGTGGCTTGTTCCTCCTGTTGCTGCACAATCACCCTCATCTTTTCCTCCTCTTCCTGTGGAGGATGAAACGTGGGGAGGAAATGGGGGTGGTCTTGGAAGAGACGGAAAGTATGATTTGGTTCCTTGGGCTAATGAGTTTTCATTTATTGCATCCATGCCTTGCAATACAGCAGAAGAAAGACAAGTTCGTGATAGAAAAGCATTTCTTCTGCACAGCCTGTTTGTTGATGTTGCCATTTTCAGAGCAATAAAGGCCATCAAATATGTTATGGAAGAGCCCAAGTTTAGCTGCTCAATTGTAGAAAATAATATTATTTACACTGAGAGAGTAGGTGACTTGAATATCAACGTCTTGAAAGATGTTTCTGTTGCAAGCTATAAGATTGATACTAAAATTGACAGAGTTGAAGCTACTGGAGTAAATCAAAAGGATCTACTAGAGCGAAATATACTGAAAGGAATCACTGCTGATGAAAATACTGCTGCCCATGATATTACCACTTTAGGTGTAATTAATGTAAGATATTGTGGTTATGTGGTCACAGTGAAAGTTGAGCGAGGAGTTAATGAAAATGTTGACTCTCCATCTCAACAAAATATTGAATTGTTTGATCAGCCAGAGGGTGGTGCCAACGCGCTCAATATTAACAGTCTGAGATTACTTCTTCACAATACAACTCCACCAGAAAACAATAAACCAATGTCTCAGATACAAACATTTGAGAGTGAAGAGTTTGGTGCTTCCCATGCTTTTCTGGAGAAGCTGATTAAAGAAAGTCTTGCTAAGCTTGAGGAAGAAGAACCAGGTATTGACTATTTTGTAAGATGGGAACTTGGAGCTTGCTGGATACAACATTTGCAAGACCAAAATAATACAGAAAAAGATAAGAAACTATCTTTGGAGAAGGCTAAGAATGAAATGAAGGTTGAGGGTCTTGGGAAACCCCTTAAAGCCCTAAAGAATTATAAAAAGAAATCTGATTCTAGCAATACTAATTCTGCAACTGAATATTCAAAGTTTAATCGGGAGGCTGAAAGCCCTCCATTTCCCTCAATTGAATCCCAACTTGAAACTACAGAAGCTGAGAATGAGCTTGTTCTGAAAAGGATATTATCTGAGGAAGCTTTTACCCGATTAAAAGAATCGGGAACTGGACTTCACTGCAAGTCTATGCATGATTTGATTAACTTATCTCGAAAATATTACACAGACGTTGCTCTCCCAAAATTGGTAGCCGATTTCGGCTCATTGGAACTCTCACCAGTTGATGGACGCACTCTAACTGATTTTATGCATACTCGGGGTCTACGAATGCGTTCTCTTGGACATGTTGTCAAGCTTTCAGAAAAGCTTTCACATGTCCAATCACTTTGTATTCATGAGATGATAGTTCGAGCTTTTAAGCACATCCTGCGGGCAGTAATTTCTGCTGTTGACAAGGAGAAAATGGCTTCATCAATTGCTGGTGCATTGAATTTGCTGCTTGGTGTTCCTGAAAATAGAGAATTAGATAAATCACGTGAAGTTCACCCATTGGTGTGGAAATGGCTAGAGTTGTTTTTGAAGAAGCGATTTGATTGGGATCCTAACAAGTTGAATTACAAGGATGTGAGGAAATTTGCAATTTTACGTGGCTTGTGTCACAAGGTGGGAATTGAGCTTGTTCCAAGGGATTTTGATATGGATTCCCCAATTCCCTTTCAAAAATCTGATATTGTCAGCTTGGTCCCTGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTCCTAGAGTCATCCAAAACTGCTTTAGACAAGGGAAAGCTTGAGGATGCAGTTACCTATGGCACAAAGGCTCTTGCTAAGCTGGTAGCAGTTTGTGGTCCCTATCATCGGATGACAGCGGGAGCCTACAGCCTCCTTGCTGTAGTTTTATATCATACTGGAGATTTCAATCAGGCTACAATTTATCAACAAAAAGCTTTGGATATCAACGAGAGAGAGTTAGGTCTGGATCATCCTGATACCATGAAGAGCTATGGGGATCTTGCTGTTTTCTATTACAGACTTCAACACACCGAGCTGGCTCTGAAGTATGTGAAGCGTGCTTTATATCTTCTGCATCTAACATGTGGCCCATCTCATCCAAACACTGCTGCTACTTACATTAATGTGGCTATGATGGAAGAAGGTCTGGGAAATGTACATGTTGCTCTCCGATATCTTCACAAAGCTTTAAAGTGCAACCAAAGATTACTTGGTGCAGATCATATTCAGACAGCTGCAAGTTATCATGCAATAGCAATAGCACTTTCATTGATGGAAGCATATCCATTGAGTGTCCAGCATGAGCAAACAACTTTGCAAATTCTGCGGGCAAAACTTGGCCCTGATGACTTGCGCACACAGGATGCTGCGGCTTGGCTTGAGTATTTTGAGTCCAAGGCTTTTGAACAGCAAGAAGCTGCTCGAAATGGTACTCGAAAACCTGATGCATCAATAGCTAGCAAAGGCCATCTTAGTGTGTCAGATTTGCTTGACTACATTAATCCTAATACTAAAGGGAGAGATGCAGCAGCAAAGAGAAGAAGCCAGATAACAAAGGTGAGAGCAACGTCTTACCCAAACGTTGGGATGTCAAGTTCTGATGAATCTTCAAAAGAAATTCCAAAAGAGGCTTCAGATGAAGAGGTACAAATACCCATACTAGTAGGTAGTGCAGATTCTGAGCAGGAAAACAACTCTGGACCTGATTTGGAACAAGCTATTTTGAAACAAATATCGGACGAAAAGCCACAAATTTATGATGAAATCTTGTCTGAAGCACATGCTGAAGGAGAGGATGGATGGCAACCAGTTCAAAGACCAAGATCAGCTGGCTCATATGGCCGGAGACTGAAGCAGAGACGGGCAACACTTGGCAAAGTTTATAGTTATCAAAAGAATGTGGAAGTTGGCTCAGAATCTCCTTTTGTAAGGAGTCCTAATCCGAGTAGTAGGTATTATTTCTTGAAGAAGCGGACAATTTCACATGGGAGTTATACAGATGATCATACCGTAAACATCACCCAAGGTACTAAATTTGGAAGGAAAGTAGTCAAAGCTGTTACATACAGGGTCAAGTCTGTGCCCTCAACTTCCAAGCCTTGTGTAAATGAGAAATTAGAAAATGGGGATAAGCTGCTCAGTTCTCTTCCAGAACCTGATCCAACTGATGCTAATCCAGTTAAGAAGTCTATTGTTAGTCTTGGAAAGTCTCCTTCATACAAGGAAGTGGCCTTAGCTCCTCCAGGGACAATCTCTAAGTTTCAGGTCTATAATCCTCAAAGTGAGATTTCTGTTAGCAGTGAGCATGATGGTGGAAAACATGAAGAGGAAGATATTGAAGCTGATAGAAATGTTAATGTTGATCCAACCCCGACAGAGGTAAATGATATGGTTAAAGAGAAGAATGATGATTCTTTATCAGATTCTGTAGATGACTCACAGGATGATACTGGAGTTGCTATTGAGGGGAAAGAAGAAACTCAGTTGATTGTTGCTGTGCAAGATAATTGTATGAGTGCTGAGGGGCAATCAGGAGATGTTGAAGCTCAAGGAGCAGTTGATAACAGCATATTGATTCATGCAGTAGATGATCATGTGGATTCTTCCAAGCAAGAACTTGATGCAAGTAATTCATCTGCCAGTTTAGAACCTAGTGATAATACAAATCCCACTTCTCAGGGTGGTGAGGATTTAAAGGTCAATGTATCACCATCAAGTCAGAGTCATACTGGGGGCATCCCATATAAGAAATTGTCTGCATCTGCAGCTCCATTCAACCCATCACCTGCCATTGCACGTGCTGCACCAATTGCCATGAATATGACTCTTCCTTCTGGTCCTAGTGCAGTTCCTGCAATTGGCCCCTGGCCAGTAAACATGAATGTTCATCCTGGACCTACTACTGTGCTACCCACAGTTGCCCCAATGTGCTCCTCTCCGCACCATGCATATCCATCACCTCCAGCGACACCAAACATGATGCAACCGCTGCCATTTGTGTATCCTCCTTTTACTCAGCCTCAATCAGTAGCACCTAGCAACTATCCTGTCACTAGCAGTGCCTTTCATGCCAATCATTTTACATATTTGAACCCAACAATATCTAAGTTTGGTCCCAGTGCTGTTTGGCCTGGTTGTCATCCTGTAGAATTTCCTCTTCCAGTACCTATTGTTGAACCAATCCGTGATCCCATTTCAGAGTCACAAGTTCTGTGTCATGGCTCTGAAAGTCCAAGTTCAGCTTCAGTTCTTCCTGAGGACATTGACAGTATTGGGGATTCCAATCAAGGGGTAAAAACTTTATCATCAGAGATAAGTGAAGATGAAGCAGTGAGAGCTGGTTCAGAAAATATAAAAGAAAATGGTAATATGAATTTTCACGGGTCTGAAAATGCTGGGAACAAGCAAAATCAAAACTTTGGTTCAAATGGCAGCTCTAGCAGTAGTGAAACTAACATGGATGGTGAGAAAACCTTTAGCATTTTGATTCGGGGAAGAAGAAATCGAAAGCAGACTCTGAGAATGCCAATAAGTTTGCTTACTCGACCTAATGGCTCACAGTCATTTAAGGTTATTTATAACCGTGTGGTTAGAGGAAGTCATGCTACCAAGTCTATGAATTTGTCTTCTAGTAAAGATTGTACAGCTACTGCATAG 5520 0.4281 MAPRNSRGKAKGEKKKKEEKVLPVVIDITVKLLDETHVLKGISTDRIIDVRRLLSVNTETCYITNFSLSHEVRGPRLKDTVDVSALKPCILDLVEEDYDEDRAVAHVRRLLDIVACTTSFGPPSPKNDSGTVQKSGKSEAPPSKQSAKDAAAADLDGEISHSCPKLENFYEFFSLSHLTAPIQYVKRGSRRHVEEISEEDYLFSLDVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQLSRAFDNAFDDLLKAFSERNKFGNLPYGFRANTWLVPPVAAQSPSSFPPLPVEDETWGGNGGGLGRDGKYDLVPWANEFSFIASMPCNTAEERQVRDRKAFLLHSLFVDVAIFRAIKAIKYVMEEPKFSCSIVENNIIYTERVGDLNINVLKDVSVASYKIDTKIDRVEATGVNQKDLLERNILKGITADENTAAHDITTLGVINVRYCGYVVTVKVERGVNENVDSPSQQNIELFDQPEGGANALNINSLRLLLHNTTPPENNKPMSQIQTFESEEFGASHAFLEKLIKESLAKLEEEEPGIDYFVRWELGACWIQHLQDQNNTEKDKKLSLEKAKNEMKVEGLGKPLKALKNYKKKSDSSNTNSATEYSKFNREAESPPFPSIESQLETTEAENELVLKRILSEEAFTRLKESGTGLHCKSMHDLINLSRKYYTDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILRAVISAVDKEKMASSIAGALNLLLGVPENRELDKSREVHPLVWKWLELFLKKRFDWDPNKLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSPIPFQKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNTKGRDAAAKRRSQITKVRATSYPNVGMSSSDESSKEIPKEASDEEVQIPILVGSADSEQENNSGPDLEQAILKQISDEKPQIYDEILSEAHAEGEDGWQPVQRPRSAGSYGRRLKQRRATLGKVYSYQKNVEVGSESPFVRSPNPSSRYYFLKKRTISHGSYTDDHTVNITQGTKFGRKVVKAVTYRVKSVPSTSKPCVNEKLENGDKLLSSLPEPDPTDANPVKKSIVSLGKSPSYKEVALAPPGTISKFQVYNPQSEISVSSEHDGGKHEEEDIEADRNVNVDPTPTEVNDMVKEKNDDSLSDSVDDSQDDTGVAIEGKEETQLIVAVQDNCMSAEGQSGDVEAQGAVDNSILIHAVDDHVDSSKQELDASNSSASLEPSDNTNPTSQGGEDLKVNVSPSSQSHTGGIPYKKLSASAAPFNPSPAIARAAPIAMNMTLPSGPSAVPAIGPWPVNMNVHPGPTTVLPTVAPMCSSPHHAYPSPPATPNMMQPLPFVYPPFTQPQSVAPSNYPVTSSAFHANHFTYLNPTISKFGPSAVWPGCHPVEFPLPVPIVEPIRDPISESQVLCHGSESPSSASVLPEDIDSIGDSNQGVKTLSSEISEDEAVRAGSENIKENGNMNFHGSENAGNKQNQNFGSNGSSSSSETNMDGEKTFSILIRGRRNRKQTLRMPISLLTRPNGSQSFKVIYNRVVRGSHATKSMNLSSSKDCTATA* 1840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0496 1839 MobiDBLite consensus disorder prediction 1488 1536 - -
Gso7g0496 1839 MobiDBLite consensus disorder prediction 601 616 - -
Gso7g0496 1839 Pfam Translation initiation factor eIF3 subunit 135 695 836 IPR033646 -
Gso7g0496 1839 MobiDBLite consensus disorder prediction 1739 1775 - -
Gso7g0496 1839 ProSiteProfiles Clueless (Clu) domain profile. 296 573 IPR025697 -
Gso7g0496 1839 MobiDBLite consensus disorder prediction 121 151 - -
Gso7g0496 1839 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1821 IPR027523 GO:0006996
Gso7g0496 1839 Pfam Tetratricopeptide repeat 906 976 - -
Gso7g0496 1839 Pfam Tetratricopeptide repeat 990 1064 - -
Gso7g0496 1839 MobiDBLite consensus disorder prediction 1147 1168 - -
Gso7g0496 1839 MobiDBLite consensus disorder prediction 1415 1429 - -
Gso7g0496 1839 MobiDBLite consensus disorder prediction 596 633 - -
Gso7g0496 1839 CDD CLU-central 697 837 IPR033646 -
Gso7g0496 1839 MobiDBLite consensus disorder prediction 121 142 - -
Gso7g0496 1839 MobiDBLite consensus disorder prediction 1217 1237 - -
Gso7g0496 1839 SMART tpr_5 949 982 IPR019734 GO:0005515
Gso7g0496 1839 SMART tpr_5 991 1024 IPR019734 GO:0005515
Gso7g0496 1839 SMART tpr_5 907 940 IPR019734 GO:0005515
Gso7g0496 1839 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1821 - -
Gso7g0496 1839 MobiDBLite consensus disorder prediction 1493 1535 - -
Gso7g0496 1839 Gene3D Tetratricopeptide repeat domain 866 977 IPR011990 GO:0005515
Gso7g0496 1839 Gene3D Tetratricopeptide repeat domain 978 1119 IPR011990 GO:0005515
Gso7g0496 1839 SUPERFAMILY Hypothetical protein c14orf129, hspc210 191 264 IPR023231 -
Gso7g0496 1839 Coils Coil 559 582 - -
Gso7g0496 1839 Pfam Mitochondrial function, CLU-N-term 44 114 IPR028275 -
Gso7g0496 1839 MobiDBLite consensus disorder prediction 1715 1775 - -
Gso7g0496 1839 SUPERFAMILY TPR-like 873 978 IPR011990 GO:0005515
Gso7g0496 1839 MobiDBLite consensus disorder prediction 1388 1405 - -
Gso7g0496 1839 ProSiteProfiles TPR repeat profile. 907 940 IPR019734 GO:0005515
Gso7g0496 1839 MobiDBLite consensus disorder prediction 1385 1437 - -
Gso7g0496 1839 SUPERFAMILY TPR-like 944 1071 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0496 Gso-Chr7 4970123 4986436 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0496 K03255 - gmx:100808136 3547.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0496 7 4970123 4986436 Gso7g0496 7 4970123 4986436 ECH
Gso7g0496 7 4970123 4986436 Gso16g0202 16 2344220 2361160 GST
Gso15g1195 15 11884352 11891144 Gso7g0496 7 4970123 4986436 PCT
Gso7g0496 7 4970123 4986436 Gso15g1195 15 11884352 11891144 PCT