Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0202 ATGAAACCAACCTTCTCTTATGAACATTTCACTTCATTCTGCTCCCTCCTCCCTCTGAAACCTCTTTCTCTGCCTCATTTTTATACCTATCTATTTCATAATACATCTTTGGGTTATATACCCAACAATGCATTAAGGGTCTTTTTTTTCTTCTTTTCTCTCTTATCCAATCATCCAAGTCCTATAAAAAGCATCTATATATATATTGATATTGCTTTGGAGTGGAAAATGGCACCAAGAAACAGTCGCGGAAAGCCCAAGGGAGAGAAGAAAAAGAAGGAAGAAAAGGTTCTTCCGGTTGTCATAGATATCACTGTGAAGCTCCTCGATGAAACTCATGTTCTGAAGGGAATATCAACGGACAGAATTATAGATGTTCGTCGTCTTCTATCGGTGAATACGGAGACGTGTTATATCACAAATTTTTCCCTGTCGCATGAGGTAAGAGGGCCACGTCTGAAGGACACGGTGGACGTGTCCGCACTGAAGCCCTGCCTCCTCACTTTAGTTGAAGAGGATTACGATGAAGACCGAGCAGTGGCGCACGTGCGAAGACTCCTCGACATCGTCGCCTGCACCACGAGCTTCGGTCCGTCGTCTCTGCCGCCGCCGAAGAATGATTCTGGCACCGTCCCGAAGTCCGGCAAGCCTGAGGCGCCGCCGGCGAAGCAATCTGCGAAAGATGCGGAGGCGGCGGCGGCTACGGTGGACATTGAAGGCGAGATAAGCCACTCGTGCCCTAAGCTGGAGAACTTCTACGAGTTTTTCTCTCTCTCACACCTCACTGCACCAATCCAATATGTGAAGAGAGGTTCGAGGAGGCGCGTGGAGGAGATTTTGGAGGAGGATTATCTGTTCTCGCTGGATGTGAAGGTGTGTAACGGGAAAGTGGTGCACGTTGAGGCATGCAGAAAGGGATTTTACAGCGTTGGGAAGCAGCGGATACTGTGCCATAATCTGGTTGATCTCTTGAGACAGCTTAGCAGAGCTTTTGATAATGCTTTCGATGATCTCTTGAAGGCATTTTCAGAACGTAACAAGTTTGGGAATCTCCCATATGGCTTCAGAGCCAACACGTGGCTTGTTCCTCCTGTTGCTGCACAATCACCCTCATATTTTCCTCCTCTTCCCGTGGAGGATGAAATGTGGGGAGGGAATGGGGGTGGTCTTGGAAGAGACGGAAAGTATGATTTGGTTCCTTGGGCTAATGAGTTTTCATTTATTGCATCCATGCCTTGCAAGACAGCGGAAGAAAGACAAGTTCGTGATAGAAAAGCATTTCTTCTGCACAGCCTGTTTGTCGATGTTGCCATTTTCAGAGCAATAAAGGCCATTAAACATGTTATGGAAGAGCCGAATTTTAGCTGCTCAGTTGTAGAAAATAATATTATTTACACTGAGAGAGTGGGTGACTTGAATATCAACGTCTTGAAAGATGGTTCTGTTGCAAGCTGTAAGATTGATACTAAAATTGACGGAGTTGAAGCTACTGGAGTGAATCAAAAGGATCTACTAGAACGAAATCTAATGAAAGGAATCACTGCTGATGAAAATACTGCTGCCCATGATATTACCACTTTAGGTGTAATTAATGTAAGATATTGTGGTTATGTGGTCGTTGTGAAAGTTGAGGGAGGAGTTAATGAAAATGTTGACTCTCCATCTCAACAAAATATTGAATTGTTTGATCAGCCAGAGGGTGGTGCCAACGCACTCAATATTAACAGTCTGAGATTACTTCTTCACAACACAACTTCACCAGAAAACAATAAACCAGTGTCTCAGATACAAACGTTTGAGAGTGAAGAGCTTGGTGCTTCTCATGCTTTTGTGGAGAAGCTGATTAAAGAAAATCTTGCTAAGCTTGAGGAAGAAGAACCAGGTATTGACTATTTTGTAAGATGGGAACTTGGAGCTTGCTGGGTACAACATTTGCAAGACCAAAATAATACAGAAAAAGATAAGAAACCATCATCGGAGAAGGCTAAGAATGAAATGAAGGTTGAGGGTCTTGGGAAACCCCTTAAAGCCCTAAAGAATTATAAAAAGAAATCTGATTCAAGCAATAATAATTCTGCAACTGAATATTCAAAGTTTAATCGTGAGGCTGAAAGCTCTCCATTGCCCTCTATTGAATCCCAACATGAAACTACAGAAGCTGAGAATGAGCTTGTTCTGAAAGGGATGCTATCTGATGAAGCTTTTACCCGATTAAAAGAATCGGGAACTGGACTTCACTGCAAGTCTATGCATGATTTGATTGAGTTATCTCGAAAATATTACACAGACGTTGCTCTCCCAAAATTGGTAGCCGATTTTGGCTCATTGGAACTCTCACCAGTTGATGGACGCACTCTAACTGATTTTATGCATACTCGGGGTCTACGAATGCATTCTCTTGGACATGTTGTCAAGCTTTCAGAAAAGCTTTCACATGTCCAATCACTTTGTATTCATGAGATGATAGTTCGAGCTTTTAAGCACATCCTGCGGGCAGTAATTTCTGCTGTTGACAAGGAGAAAATGGCTTCATCAATTGCTGGTGCATTGAATTTGCTGCTTGGTGTTCCTGAAAATAGAGAATCAGATAAATCACGTGAAGTTCACCCATTGGTGTGGAAATGGCTAGAGTTGTTTTTGAAGAAGCGATTTGATTGGGATCTTAACAAGTTGAATTACAAGGACGTGAAAAAATTTGCAATTTTACGTGGCTTGTGTCACAAGGTGGGAATTGAGCTTGTTCCAAGGGATTTTGATATGGATTCCCCAATTCCCTTTCAAAAATCTGATATTGTCAGCTTGGTCCCTGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTCCTAGAGTCATCCAAAACTGCTTTAGACAAGGGAAAGCTTGAGGATGCAGTTACCTATGGCACAAAGGCTCTTGCTAAGCTGGTAGCAGTTTGTGGTCCCTATCATCGGATGACAGCGGGAGCCTACAGCCTCCTTGCTGTAGTTTTATATCATACTGGAGACTTCAATCAGGCTACCATTTATCAACAAAAAGCTTTGGATATCAACGAGAGGGAGTTAGGTCTGGATCATCCTGATACCATGAAGAGCTATGGGGATCTTGCTGTTTTCTATTACAGACTTCAACACACAGAGCTGGCTCTGAAGTATGTGAAGCGTGCTTTATATCTTCTGCATCTAACATGTGGCCCATCTCATCCAAACACTGCTGCTACTTACATTAATGTGGCTATGATGGAAGAAGGTCTGGGAAATGTACATGTTGCTCTCCGATATCTTCACAAAGCTTTAAAGTGCAACCAAAGATTACTTGGTGCAGATCATATTCAGACAGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCATTGATGGAAGCATATCCATTGAGTGTCCAGCATGAGCAAACAACTTTGCAAATTCTGCGGGCAAAACTTGGCTCCGATGACTTGCGCACACAGGATGCTGCGGCTTGGCTTGAGTATTTTGAATCCAAGGCTTTTGAACAGCAAGAAGCTGCTCGAAATGGTACTCGAAAACCTGATGCATCAATAGCCAGCAAAGGCCATCTTAGTGTGTCAGATTTGCTTGACTACATTAATCCTAATACTAAAGGGAGAGATGCAGCAGCAAAGAGAAGAAGCCAGATAACAAAGGTGAGAGCAACATCTTACCAGAATACTGGCATGTCAAGTTCTGATGAATCTTCAAAAGAAATTCCAAAAGAGGCTTCAGATGAAGAGGTACAAATATCCGAACCAGTAGGTAGTGCAGATTCTGAGCAGGAGAGCAACTCTGGACCTGATTTGGAACAAGCTATTTTAAAGCAAATATCGGATGAAAAGCTACAAATTTATGATGAAATCTTCTCTGAAGCACATGCTGAAGGAGAGGATGGATGGCAATCAGTTCAAAGACCAAGATCAGCTGGCTCATATGGCCGGAGACTGAAGCAGAGACGGGCAGCACTTGGCAAAGTTTATAGTTATCACAAGAATGTGGAAGTTGGCACAGAATCTCCTTTTGTAAGGAGTCCTAATCCGAATAGTAGGTATTATTTCTTGAAGAAACGAACAATTTCCCATGGGAGTTATACAGATGATCATACTACAAACATCACCCAAGGCAATAAATTTGGAAGGAAAGTAGTCAAAGCTGTTACATACAGGGTCAAGTCCATGCCCTCAACTTCAAAGCCTTGTGCAAATGAGACATTAGAAAATGGGGATAAGCTGCTCAGTTCTCTTCCAGAACCTGATCCAATTGATGCTAATCCAGTTAAGAATTCTAAAGTTAGTCTCGGAAAGTCTCCTTCATACAAGGAAGTGGCCTTAGCTCCTCCTGGGACAATCTCCAAGTTTCAGGTCTATAATCCTCAAAGTGAGATTTCTGTTAGCAGTGAACATGATAGTGGAAAACACGAAGAGGAAGTTGAAGCTAATAGAAATGTTGATGTTGATCCAACCCTGATAGAGGTAAATGATACAGTTAAAGAGAAGAATAATGATTCTTTATCAGATTCTGTAGATGATTCACTGGATGATACTGGAGTGGCTATTGAGGGGAAAGAAGAAACTGAGTTGATTGTTGCTGTGCAAGATAATTGTATGAGTGCTGAGGGGCAATCGGGAGATGTTGAGGCTCAAGGAGCAGTTGATAGCAGCATATTGATTCATGCAGTAGATGATCATGTGGATTCTTACAAGCAAGAACTTGATACAAGTAATTCATCTGGCAGTTTAGAACCTAGTGCCAATACAAATCCCATTTCTCAGGGTGGTGAGGATTTAAGGGTCAATGTATCACCATCAAGTCAGATTCGTACCGGGGGCATCCCATATAAGAAATTGTCTGCATCTGCAGCTCCATTCAACCCATCACCTGCCATTGCACGTGCTGCACCAATTGCCATGAATATGACTCTTCCTTCTGGTCCTAGAGCAGTTCCTGCAATTGGCCCCTGGCCAGTAAACATGAATGTTCATCCTGGACCTACTACTGTGCTACCCGCAGTTGCCCCAATGTGCTCCTCTCCACACCATGCATATCCATCACCTCCAACAACACCAAACATGATGCAACCACTGCCATTTATGTATCCTCCTTTTACTCAACCTCAATCAGTATCGCCTAGCAACTTTCCAGTCACTAACAGTGCCTTTCATGCCAATCACTTCACATATTTGAACCCCACAATATCTAAGTTTGGTCCCAGTGCTGTTTGGCCTGGTTGTCATCCTGTAGAATTTCCTCTTCCAGTACCTATTGTTGAACCAATCCCTGATCCCATTTCAGAGTCACAAGCTCTGTGTCATGGTTTGGAAAGTCCAAGTTCGGCTTCAGTTCTTCCTGAGGACATTGATAATATTGGGGATTCCAATCAAGTGGTAAAAACTTTATCATCAGAGATAAGTGAAGATGAAGCAGTGAGATCTGGTTCAGAAAGTATAAAAGAAAATGGTAATATGAATTTTCACGGGTCTGAAAATGCTGGGAACAAGCAACATCAAAACATTGCTTCAAATGGCAACTCTAGCAGTAGTGGAACTAACATGGATGGTGAGAAAACCTTTAGCATTTTGTTTCGGGGAAGAAGAAATCGAAAGCAGACTCTGAGAATGCCAATAAGTTTGCTTACTCGACCTAATGGCTCACAGTCATTTAAGGTTATTTATAACCGTGTGGTTAGAGGAAGTCATGCTCCCAAGTCTATGAATTTGTCTTCAAGTAAGGATTGTACAGCTACTTCATAA 5766 0.4256 MKPTFSYEHFTSFCSLLPLKPLSLPHFYTYLFHNTSLGYIPNNALRVFFFFFSLLSNHPSPIKSIYIYIDIALEWKMAPRNSRGKPKGEKKKKEEKVLPVVIDITVKLLDETHVLKGISTDRIIDVRRLLSVNTETCYITNFSLSHEVRGPRLKDTVDVSALKPCLLTLVEEDYDEDRAVAHVRRLLDIVACTTSFGPSSLPPPKNDSGTVPKSGKPEAPPAKQSAKDAEAAAATVDIEGEISHSCPKLENFYEFFSLSHLTAPIQYVKRGSRRRVEEILEEDYLFSLDVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQLSRAFDNAFDDLLKAFSERNKFGNLPYGFRANTWLVPPVAAQSPSYFPPLPVEDEMWGGNGGGLGRDGKYDLVPWANEFSFIASMPCKTAEERQVRDRKAFLLHSLFVDVAIFRAIKAIKHVMEEPNFSCSVVENNIIYTERVGDLNINVLKDGSVASCKIDTKIDGVEATGVNQKDLLERNLMKGITADENTAAHDITTLGVINVRYCGYVVVVKVEGGVNENVDSPSQQNIELFDQPEGGANALNINSLRLLLHNTTSPENNKPVSQIQTFESEELGASHAFVEKLIKENLAKLEEEEPGIDYFVRWELGACWVQHLQDQNNTEKDKKPSSEKAKNEMKVEGLGKPLKALKNYKKKSDSSNNNSATEYSKFNREAESSPLPSIESQHETTEAENELVLKGMLSDEAFTRLKESGTGLHCKSMHDLIELSRKYYTDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMHSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILRAVISAVDKEKMASSIAGALNLLLGVPENRESDKSREVHPLVWKWLELFLKKRFDWDLNKLNYKDVKKFAILRGLCHKVGIELVPRDFDMDSPIPFQKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGSDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNTKGRDAAAKRRSQITKVRATSYQNTGMSSSDESSKEIPKEASDEEVQISEPVGSADSEQESNSGPDLEQAILKQISDEKLQIYDEIFSEAHAEGEDGWQSVQRPRSAGSYGRRLKQRRAALGKVYSYHKNVEVGTESPFVRSPNPNSRYYFLKKRTISHGSYTDDHTTNITQGNKFGRKVVKAVTYRVKSMPSTSKPCANETLENGDKLLSSLPEPDPIDANPVKNSKVSLGKSPSYKEVALAPPGTISKFQVYNPQSEISVSSEHDSGKHEEEVEANRNVDVDPTLIEVNDTVKEKNNDSLSDSVDDSLDDTGVAIEGKEETELIVAVQDNCMSAEGQSGDVEAQGAVDSSILIHAVDDHVDSYKQELDTSNSSGSLEPSANTNPISQGGEDLRVNVSPSSQIRTGGIPYKKLSASAAPFNPSPAIARAAPIAMNMTLPSGPRAVPAIGPWPVNMNVHPGPTTVLPAVAPMCSSPHHAYPSPPTTPNMMQPLPFMYPPFTQPQSVSPSNFPVTNSAFHANHFTYLNPTISKFGPSAVWPGCHPVEFPLPVPIVEPIPDPISESQALCHGLESPSSASVLPEDIDNIGDSNQVVKTLSSEISEDEAVRSGSESIKENGNMNFHGSENAGNKQHQNIASNGNSSSSGTNMDGEKTFSILFRGRRNRKQTLRMPISLLTRPNGSQSFKVIYNRVVRGSHAPKSMNLSSSKDCTATS* 1922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0202 1921 ProSiteProfiles Clueless (Clu) domain profile. 379 656 IPR025697 -
Gso16g0202 1921 Pfam Tetratricopeptide repeat 989 1059 - -
Gso16g0202 1921 Pfam Tetratricopeptide repeat 1073 1147 - -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 1573 1602 - -
Gso16g0202 1921 ProSiteProfiles TPR repeat profile. 990 1023 IPR019734 GO:0005515
Gso16g0202 1921 SUPERFAMILY TPR-like 1027 1151 IPR011990 GO:0005515
Gso16g0202 1921 MobiDBLite consensus disorder prediction 1471 1487 - -
Gso16g0202 1921 SUPERFAMILY Hypothetical protein c14orf129, hspc210 285 347 IPR023231 -
Gso16g0202 1921 CDD CLU-central 780 920 IPR033646 -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 198 230 - -
Gso16g0202 1921 Pfam Mitochondrial function, CLU-N-term 120 190 IPR028275 -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 1221 1239 - -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 1300 1319 - -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 1211 1272 - -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 648 672 - -
Gso16g0202 1921 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 77 1903 - -
Gso16g0202 1921 SUPERFAMILY TPR-like 956 1061 IPR011990 GO:0005515
Gso16g0202 1921 MobiDBLite consensus disorder prediction 684 715 - -
Gso16g0202 1921 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 77 1903 IPR027523 GO:0006996
Gso16g0202 1921 MobiDBLite consensus disorder prediction 1819 1858 - -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 1809 1858 - -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 1467 1491 - -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 1414 1438 - -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 648 720 - -
Gso16g0202 1921 MobiDBLite consensus disorder prediction 1575 1602 - -
Gso16g0202 1921 Gene3D Tetratricopeptide repeat domain 944 1198 IPR011990 GO:0005515
Gso16g0202 1921 Pfam Translation initiation factor eIF3 subunit 135 778 919 IPR033646 -
Gso16g0202 1921 SMART tpr_5 1032 1065 IPR019734 GO:0005515
Gso16g0202 1921 SMART tpr_5 990 1023 IPR019734 GO:0005515
Gso16g0202 1921 SMART tpr_5 1074 1107 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0202 Gso-Chr16 2344220 2361160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0202 K03255 - gmx:100784117 3540.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0496 7 4970123 4986436 Gso16g0202 16 2344220 2361160 GST
Gso15g1195 15 11884352 11891144 Gso16g0202 16 2344220 2361160 PCT
Gso16g0202 16 2344220 2361160 Gso15g1195 15 11884352 11891144 PCT