Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2532 ATGGCGGAAACCCTAAGCCCCAATCCCGCGATGGGTCGGAAGCAGAGACTCCGCATCCAGTCTCCGACCAGCCCCTTTGTCTTGGGCTCCAACAACGACCAGCTCGAACGCGCCCGGGCACGAGACGCACGCGCCGCCGCCAACCGCCGCAAGAGCCTCGCCCTCAACCAGCCCCTCCAGGCCAATTCCCATCCTGGCCTCAACAAACAGCAGATCCTCGACTTGTTCCAAAACTGCATCAAACTCGCCAGCGAAAACAAAATTAATCAGAAAAACACGTGGGAGTTGAACCTGATTGACCATCTTACTGATATCATCAAGGCCGAAGAAGAGCATGATGCGGAGACTAATTTTCAAAAGGCAAGCTGCACTCTTGAGGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGTGCATTCTGAGGCATATAAAGTTCTTGGTGGGATGAATAGAGCAGGCCAAGAAGCTGAGGAAGACACTACCCTGGATGGTGTTAATATTGAAAGTAGACAAGAAGAAAGCAGGAAAGAAACGAGCAAAAAGTTGTCACCTTTGTCAACATTGGAATCATCTTTTGAGGCACTTAATGTAAAGAAGTTTGATGCTGCATTTGTCGTGGATCCTCTCTATCGCCAAACAACAGCAAAATTCGATGAAGGTGGAGCCAAGGGTCTTTTAATGAATAATCTTGGTGTATATGGTGGCTGTAGGGTGCTCTTTGATTCACAAGAAGTGCCTGCTAAGTGTATGGCAAGCCAAAATCAATCTGATATTTCAGATACTATTGATCTTTCTTTTCTCAAAGATTGTATTGATCAGATGGTGTTGGACATGCGTGTAAAGGATGAAATTTCTCCAAGTCTCAGGACTATAGTAAACCAATTTGATGAAAGTAACAGAAGGCCCACTGATATTCAACTTCAAGGCCCGAGTTCAGCTGAAGATCTTGACAATGCTGATAATAATGAAAATGGTTTTGATAGAGAAGAATACGAGAACTGCACGGCCTGGAGTGATGATCATGATGACCAAACAGTTGTTGCCGATCTTGACTATAATGATGCAGATCCAAGTTTTTCCAGTTACCCTCAGGACAATGCTGAGCAATTTCCTTCCCCAGAAACTGATATGGATGACAGATTTGAAAATGTTGAGGGGTATTTATTTTTGAGTCTGGGTTTTAGTTCAAAACAAAACGCATGGGCAGGGCCTGATCATTGGAAGTATCGAAAATCCAAAGTCTCAGAGGTTCATCCTACTTCTGAAGATGGGTCGACCCTAAAAAGTAGGCAGCCAAAGAGTAAGAGACAAACAGAAGTTGATTTAAATTTCACAGATTCTCTTGAGAAAAAAGTGCTAGATACGTTTTCTCCTCCCAAGAATCCCAAATTGTTACTGCTTCCCGAAAGCAGATTGCCTTGCAATACAAAGCTTCCTGAGGACTGCCACTATCAGCCAGAGGATCTTGTCAAGTTATTTCTTCTGTCTAATGTGAAGTGTCTCGGGAGGAAGGCAAACAGGTTCTCAGATGGATCTAGAGAACAATCCAACGAATATGAATCATTCCCTTCGTGGGATAATGGAAGTGTTTGTGGGGATGACGCTGGTGACTACGGAGGTGATCTTCATAGTGACATGGAGGACTCCAACACTCTAATTACTCAGCCTCGTCAGGTCAATAAAATTGAAGTCCAGTATGACAAGACTTCCAAACAAGTTGATGTTCATGCACTGAAAATTACTCTTTGGGACCATGTTCAAGAATCTGTTAAACTTCCTTTAGAGGGTCAAAAAGATACTTTATCTTTCAAGAATATATTAGCCAACTTTCCTAGCGAATGCAATGCTGCTGCAACAATTAGCGACATCTCTCCTCATTTGTGCTTCATATGTCTATTGCATTTGGCAAATGAGAAAGGATTGAGCATTCAAAACTCCTCCAACTTGGATGATCTTGCCATACGGCTTCCACAAGTTGCTGATTCTATAAGGGGAACAGTTTAG 2007 0.433 MAETLSPNPAMGRKQRLRIQSPTSPFVLGSNNDQLERARARDARAAANRRKSLALNQPLQANSHPGLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEEHDAETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEEDTTLDGVNIESRQEESRKETSKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRVLFDSQEVPAKCMASQNQSDISDTIDLSFLKDCIDQMVLDMRVKDEISPSLRTIVNQFDESNRRPTDIQLQGPSSAEDLDNADNNENGFDREEYENCTAWSDDHDDQTVVADLDYNDADPSFSSYPQDNAEQFPSPETDMDDRFENVEGYLFLSLGFSSKQNAWAGPDHWKYRKSKVSEVHPTSEDGSTLKSRQPKSKRQTEVDLNFTDSLEKKVLDTFSPPKNPKLLLLPESRLPCNTKLPEDCHYQPEDLVKLFLLSNVKCLGRKANRFSDGSREQSNEYESFPSWDNGSVCGDDAGDYGGDLHSDMEDSNTLITQPRQVNKIEVQYDKTSKQVDVHALKITLWDHVQESVKLPLEGQKDTLSFKNILANFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNSSNLDDLAIRLPQVADSIRGTV* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2532 668 MobiDBLite consensus disorder prediction 358 372 - -
Gso6g2532 668 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 662 - -
Gso6g2532 668 MobiDBLite consensus disorder prediction 415 440 - -
Gso6g2532 668 MobiDBLite consensus disorder prediction 296 320 - -
Gso6g2532 668 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 662 IPR022816 GO:0000796|GO:0007076
Gso6g2532 668 MobiDBLite consensus disorder prediction 354 376 - -
Gso6g2532 668 MobiDBLite consensus disorder prediction 164 183 - -
Gso6g2532 668 Pfam Condensin complex subunit 2 545 656 IPR022816 GO:0000796|GO:0007076
Gso6g2532 668 Pfam Condensin complex subunit 2 24 511 IPR022816 GO:0000796|GO:0007076
Gso6g2532 668 MobiDBLite consensus disorder prediction 154 183 - -
Gso6g2532 668 MobiDBLite consensus disorder prediction 296 327 - -
Gso6g2532 668 PIRSF Condensin_H 540 659 IPR022816 GO:0000796|GO:0007076
Gso6g2532 668 PIRSF Condensin_H 261 543 IPR022816 GO:0000796|GO:0007076
Gso6g2532 668 PIRSF Condensin_H 1 270 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2532 Gso-Chr6 47053110 47058562 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2532 K06676 - gmx:100799781 1322.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0789 12 8225180 8230857 Gso6g2532 6 47053110 47058562 GST
Gso12g1613 12 39692630 39697796 Gso6g2532 6 47053110 47058562 PCT
Gso6g2532 6 47053110 47058562 Gso12g1613 12 39692630 39697796 PCT