Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1613 ATGGCGGAAGCCTTAGGCCCTAATCCAACGACGGACCACAAAAAGACGGTTCCCATGTCCGCTCGTATCCAATCTCCGACGAGCCCTTTCTTCGTGGGCTCCAACAACGACCAGCTTGAACGGGCCCAGACCCGTGAAGCCCGCGCCGCCGCAATCCGCCGCAAGCCCCTCGCCGCCAACTTCCACCCCCAACCATCCCATTCTCATCCCTGTCTCAACAAACACCAGATTCTCGACTTGTTCCATAACTGCATAAAACTTGCCTCCGAAAATAAAATTAATCAGAAAAACACATGGGAGTTGGATTTGATTGACCACCTCACTGATATTATTAGGTCTGAAGAAGGGAATCACGAGGAGACTAATTTTCAAATAGCAAGCTGTACACTGGAAGCTGGAGTCAAAATATACTCCTTAAGGGTGGATTCGGTGCATTCCGAGGCATATAAAGTCCTTGCTAGAATGAATAGAGCAGGCCAAGATACCGAGGAAGACACTACTTTAGGGAGTTTTAATGCTGAAAGTGGACAAGCAAGAAGGAAGGAAGTTGACAAAAAGTTCTCACCTTTATCAACATTGGAATCATCTTTTGAGGTTCTTAATGTAAAGAAGTTTGACGTTGCATTTGCTGTGGATCCACTCTATCGTCAGATGTCAGCAGAATTTGATGAAGGTGGAGCCAAAGGCCTTTTGATGAATAATCTTGGCATATATGGTAAATGTAGGTTGCTCTTCGATTCACTAGAAGTGCCAGGGAAGTGCATAACCAGTCAAAATGAAAGTGATATTTCAGATACAATTGATCTTTCTTTCGCCAGAGATTGTGTTGAACAAATGATATTGGACATACATACGAAGGGTGAAATCTCTCCAACTCTGAGGGTGATAGTAAATCAATTTGATGAAAATAATAAAAGGCCTTCTGATTTTCAATCTTCTACTGAGAAATCAGGTGAAGAGTTTGATGCAGCTATTGATAGTGAACTTGCCACTGAAAAAGAATATGAGAACTTCCCCTCCTGGAGTAATGATCATGATAGTGAAGCATTTCCTGCTGAATGGGGCTCTGATGATGCAGACCCAACTTTTCCAAGTTACCATCAGGAAAAAGAACCTTTTCATTCCCAAGACCCTCCTGATATGGATGACATATTTGAAAATGTTGATGGGTATTTGTTTTTGAGTCTGGGTTTTAGGTCAAAGAAAAATGCATGGGCAGGCACTGATCATTGGAAGTTTCAAAAAGCTAAAGGCTCAGAATCAGAGGTTCATCGTGCTTCTGAGGATGTGTTGGTCCAGAAAACCAGGCAGCCAGGGACAAAGAGACAAGTCGAAGTTGATTTAGATTTCACAAGTTTTGTCGAGAAAAAAATATCCGATATCTTTTCTCCTCCCAGGAATCCCAAATCATTACAGCTACCTGAAAATATACCACCTTGCATTACAAAACTTCCAGAGGACTGCCACTATGAACCAGAGGATCTTGTCAATTTATTTCTTTTGCCTTATGTAAAGTGCATTGGGAGGAAGGCAAGAAAGCTCTCAGGTGAATTTGCAGATGTATCAGGAGAACAATGCAATAACTATGAATCATTCCCTTCCTGGGACAATGGAAGTGTTTGTGATGATGATGTTACTGATGTACATAGTGAAATGGATGACTCTACCTCACTTATTTCTCAGCCACGTCAGATCAATAAAGTTGAAGTCCAGTATGACAAAACATTCAAACAAGTCAATGTTCAGGCTCTGAAAATAACACTTTGGGACCATATTCAAGAATCCGTTCAAGTTCCGATTCAGGGTAAAAAAGAAGTGGTATCTTTCAAGCACATGTTGACCAACTTTCCTAGTAAATGCAATGCTGCTGCAACTATTAGTGACATATCTCCACATTTGTGTTTCATATGCCTATTGCATTTGGCTAATGAGAAAGGATTGAACATCCAAAGCTGCCCCAACTTGGATGATCTTGGCATATGCCTACCTGATGATGGTGCCACTATTACTGGAACAGTTTAG 2022 0.4174 MAEALGPNPTTDHKKTVPMSARIQSPTSPFFVGSNNDQLERAQTREARAAAIRRKPLAANFHPQPSHSHPCLNKHQILDLFHNCIKLASENKINQKNTWELDLIDHLTDIIRSEEGNHEETNFQIASCTLEAGVKIYSLRVDSVHSEAYKVLARMNRAGQDTEEDTTLGSFNAESGQARRKEVDKKFSPLSTLESSFEVLNVKKFDVAFAVDPLYRQMSAEFDEGGAKGLLMNNLGIYGKCRLLFDSLEVPGKCITSQNESDISDTIDLSFARDCVEQMILDIHTKGEISPTLRVIVNQFDENNKRPSDFQSSTEKSGEEFDAAIDSELATEKEYENFPSWSNDHDSEAFPAEWGSDDADPTFPSYHQEKEPFHSQDPPDMDDIFENVDGYLFLSLGFRSKKNAWAGTDHWKFQKAKGSESEVHRASEDVLVQKTRQPGTKRQVEVDLDFTSFVEKKISDIFSPPRNPKSLQLPENIPPCITKLPEDCHYEPEDLVNLFLLPYVKCIGRKARKLSGEFADVSGEQCNNYESFPSWDNGSVCDDDVTDVHSEMDDSTSLISQPRQINKVEVQYDKTFKQVNVQALKITLWDHIQESVQVPIQGKKEVVSFKHMLTNFPSKCNAAATISDISPHLCFICLLHLANEKGLNIQSCPNLDDLGICLPDDGATITGTV* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1613 673 MobiDBLite consensus disorder prediction 338 379 - -
Gso12g1613 673 Pfam Condensin complex subunit 2 28 515 IPR022816 GO:0000796|GO:0007076
Gso12g1613 673 Pfam Condensin complex subunit 2 549 660 IPR022816 GO:0000796|GO:0007076
Gso12g1613 673 PIRSF Condensin_H 6 274 IPR022816 GO:0000796|GO:0007076
Gso12g1613 673 PIRSF Condensin_H 266 557 IPR022816 GO:0000796|GO:0007076
Gso12g1613 673 PIRSF Condensin_H 546 665 IPR022816 GO:0000796|GO:0007076
Gso12g1613 673 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 667 - -
Gso12g1613 673 MobiDBLite consensus disorder prediction 363 379 - -
Gso12g1613 673 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 667 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1613 Gso-Chr12 39692630 39697796 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1613 K06676 - gmx:100777082 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1613 12 39692630 39697796 Gso12g0789 12 8225180 8230857 PCT
Gso12g1613 12 39692630 39697796 Gso6g2532 6 47053110 47058562 PCT
Gso12g0789 12 8225180 8230857 Gso12g1613 12 39692630 39697796 PCT
Gso6g2532 6 47053110 47058562 Gso12g1613 12 39692630 39697796 PCT