Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2515 ATGACTTGGAAAAGCAGAGGAGAATTGCCTTCTAGAAGCGTTATCTCGCAGAGATGGGTACTGTTTCTCTGCTTAGGAAGTTTCTGTGCTGGAATGCTCTTCACTACCAGGATATGGACCATACCTGAAAACAACAAAGGACTAGCACGACCAACAGCCTCAGAAGCTGAAAAATTGAGTTTAGTTTCTGAAGGTTGCAATTCGAGAATTTTGCAAGAGATGGAAATGAAGCGCGATAAAGACATTTATGGTGAAGTTTTCAAGAGTCATAATTCCATACAAACATTGGACAAGACTATTTCGAACTTAGAGATGGAATTGGCTGCTGCTAGGGTAACTCAGGAATCTCTACGAAGTGGTGCTCCTATTTCAGATGATATAAGGTTGAGTGAATCTTCTTCGGGTAAGAGAAAGTACCTTATGGTCGTTGGTATTAACACTGCATTCAGCAGCAGGAAAAGAAGGGACTCGGTTCGAGCCACTTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAGAAGGGCATTATCATGCGCTTTGTAATTGGACACAGTGCTACATCAGGTGGTATTCTAGACAGAGCTATTGAAGCAGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTGGAAGGATACCTTGAATTGTCAGCAAAGACAAAAACCTACTTTGCCACTGCTGTGAACTTATGGGATGCTGATTTCTATGTCAAAGTTGATGATGATGTTCATGTAAATATAGCAACACTGGGACAAACTCTAGTTAGGCATCGATCAAAACCACGGATATACATTGGATGCATGAAATCTGGGCCTGTCCTATCCCAAAAAGGGGTAAGGTACCATGAACCTGAGTACTGGAAGTTTGGAGAGGCTGGAAACAGATACTTCCGTCATGCCACAGGACAGTTGTATGCCATTTCAAACGATTTGGCTACATACATATCAATTAACCAGAATGTTCTTCACAAGTATGCCAACGAGGATGTGTCACTAGGATCCTGGTTTATTGGACTTGATGTGGAGCATATAGATGATCGAAGACTTTGTTGTGGCACTCCTCCTGATTGTGAGTGGAAGGCCCAAGCAGGGAACATTTGTGTTGCATCATTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCTGAGAGGATTAAAGAGGTACATAGGAGGTGTGGAGAGGGTGAGAATGCTTTGTGGAGTGCCTCTTTCTAG 1224 0.4306 MTWKSRGELPSRSVISQRWVLFLCLGSFCAGMLFTTRIWTIPENNKGLARPTASEAEKLSLVSEGCNSRILQEMEMKRDKDIYGEVFKSHNSIQTLDKTISNLEMELAAARVTQESLRSGAPISDDIRLSESSSGKRKYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRIYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSAERIKEVHRRCGEGENALWSASF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2515 407 Coils Coil 93 113 - -
Gso6g2515 407 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 399 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso6g2515 407 Pfam Galactosyltransferase 153 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso6g2515 407 Pfam Domain of unknown function (DUF4094) 16 111 IPR025298 -
Gso6g2515 407 Gene3D - 136 352 - -
Gso6g2515 407 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED 7 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2515 Gso-Chr6 46890468 46895836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2515 1 407 Glycosyltransferase AT1G05170 78.240 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2515 K20855 - gmx:100794838 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0810 12 8519860 8524908 Gso6g2515 6 46890468 46895836 GST
Gso12g1634 12 39923632 39928277 Gso6g2515 6 46890468 46895836 PCT
Gso11g3232 11 48068956 48073641 Gso6g2515 6 46890468 46895836 PCT
Gso6g2515 6 46890468 46895836 Gso12g1634 12 39923632 39928277 PCT
Gso6g2515 6 46890468 46895836 Gso11g3232 11 48068956 48073641 PCT