Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0810 ATGACTTGGAAAAGCAGAGGAGAATTGCCTTCTAGAAGCGTTATCTCGCAGAGATGGGCACTGTTTCTCTGCTTAGGAAGTTTCTGTGCTGGAATGCTCTTCACTACAAGGATATGGACTATACCTGAAAACAACAAAGGACTAGCACGACCAACAGCCTCAGAAGCTGAAAAATTGAGTTTAGTTTCAGAAGGCTGCAATTCCAGAATTTTGCAAGAGATGGAAATGAAGCACGATAAAGACACTTATGGTGAAGTTTTCAAGAGTCATAATTCCATACAAACATTGGACAAGACTATTTCAAACTTAGAGATGGAATTGGCTGCTGCAAGGGCAACTCAGGAGTCTCTACGAAGTGGTGCTCCTATTTCAGATGATATAAGGTTGAGTGAATCTTCGGGTAAGAGAAAGTACCTTATGGTCATTGGTATTAACACTGCATTCAGTAGCAGGAAAAGAAGGGACTCGGTTCGATCTACTTGGATGCTACAAGGTGAGAAAAGAAAGAAGCTAGAGGAGAAGGGCATTATCATGCGCTTTGTAATTGGACACAGTGCTACATCAGGTGGTATTTTAGACAGAGCTATTGAAGCAGAGGACAGAAAGCATGGAGATTTCTTAAGGCTGAATCATGTGGAAGGATACCTTGAATTGTCAGCAAAGACAAAAACCTACTTTGCCACTGCTGTGAACTTATGGGATGCTGATTTCTATGTCAAAGTTGATGATGATGTTCATGTAAATATAGCAACACTGGGAGAAACTCTAGTTAGACATCGATCAAAACCACGGATATACATTGGATGCATGAAATCTGGGCCTGTCCTATCCCAAAAAGGGGTAAGGTACCATGAACCTGAGTACTGGAAATTTGGAGAGGCTGGAAACAGGTACTTCCGTCATGCCACAGGGCAGTTGTATGCCATTTCGAATGATTTGGCTACATACATATCAATTAACCAGAATGTTCTTCACAAGTATGCCAACGAGGATGTGTCACTAGGATCCTGGTTTATTGGACTTGATGTGGAGCATATAGATGATCGAAGACTTTGTTGTGGCACTCCTCCTGATTGTGAGTGGAAGGCACAAGCTGGAAACATTTGTGTTGCATCATTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCTGAGAGGATTAAAGAGGTACATAGGAGGTGTGGAGAGGGTGAGAATGTTTTGTGGAGTGCCTCTTTCTAG 1221 0.4234 MTWKSRGELPSRSVISQRWALFLCLGSFCAGMLFTTRIWTIPENNKGLARPTASEAEKLSLVSEGCNSRILQEMEMKHDKDTYGEVFKSHNSIQTLDKTISNLEMELAAARATQESLRSGAPISDDIRLSESSGKRKYLMVIGINTAFSSRKRRDSVRSTWMLQGEKRKKLEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRIYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSAERIKEVHRRCGEGENVLWSASF* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0810 406 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED 7 398 - -
Gso12g0810 406 Coils Coil 93 113 - -
Gso12g0810 406 Pfam Galactosyltransferase 152 348 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso12g0810 406 Gene3D - 135 351 - -
Gso12g0810 406 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 398 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso12g0810 406 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0810 Gso-Chr12 8519860 8524908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0810 1 406 Glycosyltransferase AT1G05170 77.451 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0810 K20855 - gmx:100776912 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0810 12 8519860 8524908 Gso12g0810 12 8519860 8524908 ECH
Gso12g0810 12 8519860 8524908 Gso6g2515 6 46890468 46895836 GST
Gso12g1634 12 39923632 39928277 Gso12g0810 12 8519860 8524908 PCT
Gso11g3232 11 48068956 48073641 Gso12g0810 12 8519860 8524908 PCT
Gso12g0810 12 8519860 8524908 Gso12g1634 12 39923632 39928277 PCT
Gso12g0810 12 8519860 8524908 Gso11g3232 11 48068956 48073641 PCT