Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1634 ATGACTTGGAAAAGCAGGGGAGACCTGCTTCCTAAAAGTGTTATGTCTCAGAAATGGATGATTTTTCTCTGTGTTGGAAGCTTCTGTGCTGGTATGTTTTTCACCAACAGGATGTGGACTATTCCTGAACCTAAAGGACTTGCACGGACAACAGCTATGGAAGCTGAAAAATTGAATGTAGTTTCAGAGGGTTGCAATTCAAGAATTTTGCAAGAGAAGGAAGTGAAGCGTGAAACCAAAGGCATCTATAGTGAGGTTTTCAAGACACAAAATGCCATACAAACCCTGGACAAAACTATTTCAAACTTGGAGATGGAATTAGCTGCTGCAAAAGCAGCTCAGGAGTCTATACGAAGTGGTGCTCCGGTAGCAGAAGATATCAAGATGAGTGAATCATCTGGTAGGAGAAGATACCTAATGGTCGTAGGAATTAACACTGCTTTCAGCAGCAGAAAAAGAAGAGACTCAGTTCGTGAGACATGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAAAAGGGAATTATCATCCGATTTGTAATTGGTCATAGTGCCACATCAGGGGGTATCTTAGACAGAGCTATTGAAGCAGAAGATAGGAAGCATGGAGATTTCCTGAGACTGGATCATGTTGAAGGATACCTTGAATTGTCAGCAAAGACAAAGACATACTTTGCCACTGCTGTTAACTTATGGGATGCTGACTTCTATATCAAAGTTGATGACGATGTTCATGTAAATATAGCGACACTGGGACAAACTCTACTGAGACATCGATCAAAACCGCGGGTGTACATAGGATGCATGAAATCTGGGCCTGTTCTTTCTCAAAAAGGGGTAAGGTACCATGAACCAGAATACTGGAAATTTGGAGAGGCCGGAAACAAGTACTTCCGCCACGCCACAGGACAGTTGTATGCCATTTCAAAAGATCTGGCTACATATATTTCAAATAACAAGCACGTTCTCCACAAGTATGCCAATGAGGATGTCTCACTAGGTTCTTGGTTTATTGGACTAGATGTGGACCACATAGATGATCGAAGACTCTGCTGTGGTACACCACCAGATTGTGAATGGAAAGCACAGGCAGGCAATGTTTGTGTTGCTTCATTTGATTGGACGTGCAGCGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAGGTTCACAAGAGATGTGGTGAAGGTGAGAAAGCCTTGTGGAATGCCTCTTTCTAA 1224 0.4273 MTWKSRGDLLPKSVMSQKWMIFLCVGSFCAGMFFTNRMWTIPEPKGLARTTAMEAEKLNVVSEGCNSRILQEKEVKRETKGIYSEVFKTQNAIQTLDKTISNLEMELAAAKAAQESIRSGAPVAEDIKMSESSGRRRYLMVVGINTAFSSRKRRDSVRETWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVNLWDADFYIKVDDDVHVNIATLGQTLLRHRSKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISKDLATYISNNKHVLHKYANEDVSLGSWFIGLDVDHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHKRCGEGEKALWNASF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1634 407 Pfam Galactosyltransferase 152 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso12g1634 407 Coils Coil 93 113 - -
Gso12g1634 407 SUPERFAMILY PspA lactotransferrin-binding region 42 112 - -
Gso12g1634 407 PANTHER HEXOSYLTRANSFERASE 8 399 - -
Gso12g1634 407 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 399 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso12g1634 407 Gene3D - 136 351 - -
Gso12g1634 407 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1634 Gso-Chr12 39923632 39928277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1634 1 407 Glycosyltransferase AT1G05170 77.396 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1634 K20855 - gmx:100793931 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1634 12 39923632 39928277 Gso11g3232 11 48068956 48073641 GST
Gso12g1634 12 39923632 39928277 Gso12g0810 12 8519860 8524908 PCT
Gso12g1634 12 39923632 39928277 Gso6g2515 6 46890468 46895836 PCT
Gso12g0810 12 8519860 8524908 Gso12g1634 12 39923632 39928277 PCT
Gso6g2515 6 46890468 46895836 Gso12g1634 12 39923632 39928277 PCT