Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2459 ATGGCTTCTCATCAATTCCTCGACAACTTCATAATTCCCGATCACATTCTCGTACCGGGCTCCTCCGACTCCGAGGTTGAAAATGTCGGTGACGTGCCTCACTGTCCGGTCCTTGTTTTCGTCAACTCCAAGAGTGGCGGTCAACTCGGCGGACATCTCCTCAAAACATATCGCGATCTTCTTAATCCCAAACAGGTTTTTGATTTGGGGGAACATGCTCCTGACAAGGTTCTCAGAACAGTGTATGCTAATTTGGAAGGCCTCAACGTACGGGGTTATCAGTTTGCTGACAAGATCAAGGAGAGATTGAAGTTAATTGTTGCAGGGGGTGATGGAACAGCAGGTTGGCTTCTTGGAGTTGTTTGTGATCTCAAATTATCTCATCCTCCACCAATAGCCACGGTCCCTTTGGGCACAGGGAATAATCTACCTTTTGCATTTGGTTGGGGAAAGAAGAACCCAGCGACAGATCAAAGATCCGTTGAGGCATTTTTAGATCAAGTCATGAAGGCTACAAAAATGAAAATAGACAACTGGCACATTCTCATGAGAATGAGAGCTCCTAAAGAAGGTCCCTGTGATCCTATTCCACCACTTGAGCTACCACATTCTTTGCATGCCTTCCATCGTGTATCTGAATCAGATGAATTTAATATGGAAGGTTGCCACACATTTCGTGGGGGGTTTTGGAATTATTTCAGTATGGGAATGGATGCTCAAGTGTCTTACGCATTTCATTCAGAACGAAAGAAGAATCCTGAAAAATTCAAAAACCAGTTAATTAATCAGACTACTTATGCTAAGCTTGGATGCTCACAAGGATGGTTTTTTGCTTCTATGTCGCATCCTGCCGACAGGAACATAGCACAACTAGCGAAAGTAAAATTCATGAAAAGACATGGTGAATGGCAAGACCTAGACATACCTCCCAGCATCCGGTCAATTGTATGTCTCAACTTGCCTAGCTTTTCTGGCGGATTCAATCCATGGGGTACACCAAATAGGAGGAAGCAGAGTGACAGAGATTTGACACCACCATTTGTTGATGATGGCCTTCTAGAAATTGTTGGTTTTAGAAATGCATGGCATGGACTTGTTTTACTTGCTCCAAAAGGACATGGAACTCGTCTTGCTCAGGCACATAGAATCCAGTTTGAGTTTCGCAAAGGTGCAGCAGATCATACATTCATGAGGATTGATGGGGAACCTTGGAAGCAACCTCTTCCAGTTGATGATGATACTGTTATGGTTGAGATTTCTCACCATGGCCAGGTTAACATGCTATCCACTCATAATTGCAAGTCTAAAAGTGTGTATGATCCTTCATCACCACACCATGAGGATGAGGAAGACGACAGTGATGAAGAAGACTCTGTAGCAGAGGAATTTCGGAAGTTTGGAGCAGCTGATACATTTAGAATCCCAGATGAGGTTGATGTTTCTCATCTTAGTTAG 1455 0.4364 MASHQFLDNFIIPDHILVPGSSDSEVENVGDVPHCPVLVFVNSKSGGQLGGHLLKTYRDLLNPKQVFDLGEHAPDKVLRTVYANLEGLNVRGYQFADKIKERLKLIVAGGDGTAGWLLGVVCDLKLSHPPPIATVPLGTGNNLPFAFGWGKKNPATDQRSVEAFLDQVMKATKMKIDNWHILMRMRAPKEGPCDPIPPLELPHSLHAFHRVSESDEFNMEGCHTFRGGFWNYFSMGMDAQVSYAFHSERKKNPEKFKNQLINQTTYAKLGCSQGWFFASMSHPADRNIAQLAKVKFMKRHGEWQDLDIPPSIRSIVCLNLPSFSGGFNPWGTPNRRKQSDRDLTPPFVDDGLLEIVGFRNAWHGLVLLAPKGHGTRLAQAHRIQFEFRKGAADHTFMRIDGEPWKQPLPVDDDTVMVEISHHGQVNMLSTHNCKSKSVYDPSSPHHEDEEDDSDEEDSVAEEFRKFGAADTFRIPDEVDVSHLS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2459 484 Pfam Diacylglycerol kinase catalytic domain 36 161 IPR001206 GO:0016301
Gso6g2459 484 Pfam Diacylglycerol kinase accessory domain 229 403 IPR000756 GO:0004143|GO:0007205
Gso6g2459 484 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 34 410 IPR016064 -
Gso6g2459 484 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 32 185 IPR001206 GO:0016301
Gso6g2459 484 SMART dagk_c4b_2 231 403 IPR000756 GO:0004143|GO:0007205
Gso6g2459 484 Gene3D - 228 411 - -
Gso6g2459 484 SMART dagk_c4a_7 36 179 IPR001206 GO:0016301
Gso6g2459 484 PANTHER DIACYLGLYCEROL KINASE 5 484 IPR037607 GO:0004143|GO:0007165
Gso6g2459 484 PANTHER DIACYLGLYCEROL KINASE 5 484 - -
Gso6g2459 484 PIRSF DAG_kinase_plant 2 434 IPR016961 GO:0004143
Gso6g2459 484 MobiDBLite consensus disorder prediction 434 459 - -
Gso6g2459 484 Gene3D - 35 182 IPR017438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2459 Gso-Chr6 46244085 46250419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2459 6 477 Acyl Lipid Metabolism Gene Families AT2G20900 75.262 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2459 K00901 - gmx:100817198 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0873 12 9756402 9757518 Gso6g2459 6 46244085 46250419 GST
Gso12g1695 12 40577116 40583374 Gso6g2459 6 46244085 46250419 PCT
Gso11g3174 11 47531230 47536611 Gso6g2459 6 46244085 46250419 PCT
Gso6g2459 6 46244085 46250419 Gso12g1695 12 40577116 40583374 PCT
Gso6g2459 6 46244085 46250419 Gso11g3174 11 47531230 47536611 PCT