Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0873 ATGGCACTTTCCATTATATCTACAGCATTCAGTCAATTGTATGTCTCAACTTGCCCAGCTTTTCTGGTGGATTCAATCCATGGGAGAGATTTGACACCACTATTTGTAGATGATGGCCTTCTAGAAGTTGTTGGTTTTAAAAATGCATGGCATGGACTTGTTTTGCTTGCTCCAAAAGGACATGGAACTCGTCTTGCTCAGGCACACAGAATCCGGTTTGAGTTTCGCAAAGGTGCAGCAGATCATACATTCATGAGGATTGATGGGGAACCTTGGAAGCAACCTCTTCCAATTGATGATGATACTGTTGTTGTTGAGATTTCTCACCTTGGCCAGGTCAACATGCTATCCACTCATAATTGCAAGTCTAAAAGTGTGTATGATCCTTCATCACCACACCATGAGGATGAGGAAGATGACACTGATGAAGAAGACTCTGTAGCAGAGGAATTTCGGAAGTTCGGTGCAGCCGATACATTTAGAATCCCAGATGAGGTTGATGCTTCTCAGCATAGTTAG 519 0.4297 MALSIISTAFSQLYVSTCPAFLVDSIHGRDLTPLFVDDGLLEVVGFKNAWHGLVLLAPKGHGTRLAQAHRIRFEFRKGAADHTFMRIDGEPWKQPLPIDDDTVVVEISHLGQVNMLSTHNCKSKSVYDPSSPHHEDEEDDTDEEDSVAEEFRKFGAADTFRIPDEVDASQHS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0873 172 Pfam Diacylglycerol kinase accessory domain 32 91 IPR000756 GO:0004143|GO:0007205
Gso12g0873 172 MobiDBLite consensus disorder prediction 123 147 - -
Gso12g0873 172 PANTHER DIACYLGLYCEROL KINASE 28 169 IPR037607 GO:0004143|GO:0007165
Gso12g0873 172 PANTHER DIACYLGLYCEROL KINASE 28 169 - -
Gso12g0873 172 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 31 98 IPR016064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0873 Gso-Chr12 9756402 9757518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0873 29 170 Acyl Lipid Metabolism Gene Families AT2G20900 76.712 2.02e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0873 K00901 - gsj:114378683 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0873 12 9756402 9757518 Gso12g0873 12 9756402 9757518 ECH
Gso12g0873 12 9756402 9757518 Gso6g2459 6 46244085 46250419 GST
Gso12g1695 12 40577116 40583374 Gso12g0873 12 9756402 9757518 PCT
Gso11g3174 11 47531230 47536611 Gso12g0873 12 9756402 9757518 PCT
Gso12g0873 12 9756402 9757518 Gso12g1695 12 40577116 40583374 PCT
Gso12g0873 12 9756402 9757518 Gso11g3174 11 47531230 47536611 PCT