Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1695 ATGGCTTCTCACAGCGACGCCAATTCCTTGAGGGACTTTTGGATCCCGGGCCACGTTCTCGTGCCGGATTCCGTGGTTGAAGGAAGCAACATCGATATCGAAGGACCTAAGTGTCCGGTGCTCGTTTTCGTTAACTCAAGGAGTGGTGGCCAGCTAGGAGGAGAACTCTTGAAAACGTACCGTGCGCTTCTTAACGAAAACCAGGTTTTCGACTTGGGGGAAGAGGCTCCTGATAAGGTTCTGAGCAGGATCTATGCGAATTTGGAAAACCTCAGGCTTCAAGGCGATCATATTGCTATACAGATTATGGAGAAGTTGAGATTAATTGTTGCAGGGGGTGATGGAACAGCAGGCTGGCTACTTGGAGTTGTTTGTGATCTCAAATTATCTCATCCGCCACCCATTGCCACGGTTCCGTTGGGCACAGGGAATAATCTACCATTTGCATTTGGTTGGGGGAAGAAGAACCCAGGGACGGATGAACAGGCGGTCAAGTCATTTCTAGATCAAGTAATGAAAGCTAAGGAAATGAAAATAGACAACTGGCACATTCTTATGCGGATGAGGGCTCCAAAACAAGGTCCCTGTGATCCAATCCCTCCTCTTGAGTTACCACATTCTTTGCATGCCTTCCATCGTGTATCAGAGGCAGATGAACTTAATAAGGAAGGTTTCCATACTTTTCGTGGGGGATTTTGGAATTACTTCAGCATGGGAATGGATGCTCAAGTCTCTTATGCATTTCATTCTGAACGAAAATTGCATCCTGAAAAATTCAAGAATCAGTTGGTCAATCAGAGTACTTATGCTAAGCTTGGATGCACACAAGGATGGTTTTTTGCTCCTCTGTTCCACCCTCCTTCCAGCAACATAGCACATCTTGCAAAAGTAAAAGTCATGAAAACGCATGGTGGTTGGGAAGACTTGCAAATTCCTTCCAGCATCAGGTCAATTGTATGCCTTAACTTGCCTAGCTTTTCTGGTGGATTGAATCCATGGGGTACACCAAACAAGATGAAGCGGCGTGATAGAGATTTGACACCTCCATATGTAGATGATGGCCTTATAGAGGTGGTTGGTTTTAGAGATGCCTGGCATGGGCTTGTTTTGCTTGCCCCAAATGGACATGGAACTCGCCTTGCTCAGGCACACAGAATCCGCTTTGAGTTTCACAAAGGTGCGGCAGAATATACATTCATGAGGATTGATGGGGAACCTTGGAAGCAACCCCTCCCAGTTGACGATGATACTGTTTTGGTGGAAATTTCTCACCATGGCCAGGTTAACATGCTCGCCACTCATGATTCCAAGTCCAAAAGTGTGAATGATCCGTCATCACCACACCATAATGATGTCGAGGAAGATGATAGTGATGATGAAGAAGCTAAAGCAGATGAATACCGGAAGTTTGGTGCGGCAGATACATTTAAAATCCCAGATGAGGTAGACCTTGCTCATCTTAGTTAG 1467 0.4574 MASHSDANSLRDFWIPGHVLVPDSVVEGSNIDIEGPKCPVLVFVNSRSGGQLGGELLKTYRALLNENQVFDLGEEAPDKVLSRIYANLENLRLQGDHIAIQIMEKLRLIVAGGDGTAGWLLGVVCDLKLSHPPPIATVPLGTGNNLPFAFGWGKKNPGTDEQAVKSFLDQVMKAKEMKIDNWHILMRMRAPKQGPCDPIPPLELPHSLHAFHRVSEADELNKEGFHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFKNQLVNQSTYAKLGCTQGWFFAPLFHPPSSNIAHLAKVKVMKTHGGWEDLQIPSSIRSIVCLNLPSFSGGLNPWGTPNKMKRRDRDLTPPYVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFEFHKGAAEYTFMRIDGEPWKQPLPVDDDTVLVEISHHGQVNMLATHDSKSKSVNDPSSPHHNDVEEDDSDDEEAKADEYRKFGAADTFKIPDEVDLAHLS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1695 488 SMART dagk_c4b_2 234 406 IPR000756 GO:0004143|GO:0007205
Gso12g1695 488 Pfam Diacylglycerol kinase catalytic domain 39 168 IPR001206 GO:0016301
Gso12g1695 488 SMART dagk_c4a_7 39 182 IPR001206 GO:0016301
Gso12g1695 488 PANTHER DIACYLGLYCEROL KINASE 2 488 IPR037607 GO:0004143|GO:0007165
Gso12g1695 488 Gene3D - 38 185 IPR017438 -
Gso12g1695 488 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 37 413 IPR016064 -
Gso12g1695 488 Gene3D - 231 414 - -
Gso12g1695 488 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 35 188 IPR001206 GO:0016301
Gso12g1695 488 Pfam Diacylglycerol kinase accessory domain 232 406 IPR000756 GO:0004143|GO:0007205
Gso12g1695 488 PANTHER DIACYLGLYCEROL KINASE 2 488 - -
Gso12g1695 488 MobiDBLite consensus disorder prediction 433 466 - -
Gso12g1695 488 PIRSF DAG_kinase_plant 3 437 IPR016961 GO:0004143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1695 Gso-Chr12 40577116 40583374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1695 4 481 Acyl Lipid Metabolism Gene Families AT2G20900 76.141 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1695 K00901 - gmx:100813809 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1695 12 40577116 40583374 Gso11g3174 11 47531230 47536611 GST
Gso12g1695 12 40577116 40583374 Gso12g0873 12 9756402 9757518 PCT
Gso12g1695 12 40577116 40583374 Gso6g2459 6 46244085 46250419 PCT
Gso12g0873 12 9756402 9757518 Gso12g1695 12 40577116 40583374 PCT
Gso6g2459 6 46244085 46250419 Gso12g1695 12 40577116 40583374 PCT