Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2450 ATGGCGGTGGAGAGTGACAAAGTGGGTTCTGATGGGAAAGTTTGGAGCTTTTGCAGCATGCCATTTTGGCAAACAACTCATGCTTCTTCATCTTCTTCTTCAACAACAACAACAATACCAACAACTTCTTCTATGCATCATAGTGTTCACCATCAGAGCCAGATTCTTCAGTCTCTTGATAGATCCACTCATCAACCTTCCACCACTGTCTCTTCTGTGGCTAAATCTCTTCTCCCCACAAGGAGAAGGCTCCGTCTTGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGCGCCATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCGGGTGGTATTCTTGGACCTGGTGAAAGTATAATTGCAACTGTGTTTAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAGAAAAGCAGGGTTAAGTTTAAAATCATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGATGAGCAAAGGGATCATGTAGCAGACGAGCAAATTTTGCGTGTCATTTTTCTGGACCCTGAACGCCCTAGCCCTGCTTTGGATAAGCTTAAACGGCAGCTAGCTGAGGCTGAGGCTGCATTGGAAGCAAGAAAGAAGCCCCCGGAGGAGACAGGTCCTCGAGTTGCTGGTGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCCAGGCAGCAGGTTGAAGTGGTAGATTCAGTGTAA 816 0.4473 MAVESDKVGSDGKVWSFCSMPFWQTTHASSSSSSTTTTIPTTSSMHHSVHHQSQILQSLDRSTHQPSTTVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILGPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDHVADEQILRVIFLDPERPSPALDKLKRQLAEAEAALEARKKPPEETGPRVAGEGLVIDEWKERRERYLARQQVEVVDSV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2450 271 MobiDBLite consensus disorder prediction 26 73 - -
Gso6g2450 271 Pfam MSP (Major sperm protein) domain 84 194 IPR000535 -
Gso6g2450 271 SUPERFAMILY PapD-like 72 212 IPR008962 -
Gso6g2450 271 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 39 270 IPR016763 GO:0005789
Gso6g2450 271 Gene3D Immunoglobulins 79 209 IPR013783 -
Gso6g2450 271 ProSiteProfiles Major sperm protein (MSP) domain profile. 83 205 IPR000535 -
Gso6g2450 271 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 39 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2450 Gso-Chr6 46192826 46195958 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2450 - - gmx:100820576 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0875 12 9808159 9811268 Gso6g2450 6 46192826 46195958 GST
Gso12g1702 12 40611193 40615223 Gso6g2450 6 46192826 46195958 PCT
Gso11g3166 11 47491321 47495133 Gso6g2450 6 46192826 46195958 PCT
Gso6g2450 6 46192826 46195958 Gso12g1702 12 40611193 40615223 PCT
Gso6g2450 6 46192826 46195958 Gso11g3166 11 47491321 47495133 PCT