Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1702 ATGGAGGTGGAGACTGAAAAATCAGGGTCTGATGGGAAGGGTTGGAGTTTTTGTAGAATGCCATTTTGGCAAACAACTCATACTCCTTCTTCTTCTTCTTCATCTTCCATGTCTTACATGCACAATGTTCATCAGCAAAGTCAGAATAATGCTCAATCTGTTGATAGATCCAGTCATCATTCTTCAACAACAGTTTCATCTGTGGCCAAGTCTCTGCTCCCTACAAAGAGGAGGCTCCGCCTTGATCCTTCCAACAAGCTCTACTTTCCATATGAACCTGGTAAGCAAGTTAGGAGTGCAATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCTGGGGGTATTCTTGCCCCTGGTGAAAGTATTATTGCCACTGTGTTCAAGTTTGTGGAGCCACCTGAGAACAATGAGAAATCAATTGATAAAAAAAGCAAGGTTAAGTTTAAAATTATGAGCTTAAAAGTGCAAGGTGAAATGGACTATGTACCGGAAATGTTTGATGAGCAAAGAGATCAAGTGGCAATAGAGCAAATTCTGCGGGTTATGTTTCTGGACCCTGAAAGGCCTAGTCCTGTCCTGGATAAGCTTAAACGAATGTTGGCCGAGGCCGATGCTGCACTTGAAGCACGAAAGAAACCGCCAGAGGAGAAAGGTCCCCGTGTTGCTGGGGAAGGCCTTGTTATAGACGAATGGAAAGAAAGAAGAGAAAGATACTTGGCTCAACAGCAGGTCCAAGGTGTTGATTCAATGTAA 801 0.432 MEVETEKSGSDGKGWSFCRMPFWQTTHTPSSSSSSSMSYMHNVHQQSQNNAQSVDRSSHHSSTTVSSVAKSLLPTKRRLRLDPSNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKSIDKKSKVKFKIMSLKVQGEMDYVPEMFDEQRDQVAIEQILRVMFLDPERPSPVLDKLKRMLAEADAALEARKKPPEEKGPRVAGEGLVIDEWKERRERYLAQQQVQGVDSM* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1702 266 ProSiteProfiles Major sperm protein (MSP) domain profile. 78 200 IPR000535 -
Gso12g1702 266 Pfam MSP (Major sperm protein) domain 79 189 IPR000535 -
Gso12g1702 266 MobiDBLite consensus disorder prediction 29 70 - -
Gso12g1702 266 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 31 264 IPR016763 GO:0005789
Gso12g1702 266 Gene3D Immunoglobulins 74 204 IPR013783 -
Gso12g1702 266 SUPERFAMILY PapD-like 67 208 IPR008962 -
Gso12g1702 266 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 31 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1702 Gso-Chr12 40611193 40615223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1702 - - gmx:100816998 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1702 12 40611193 40615223 Gso11g3166 11 47491321 47495133 GST
Gso12g1702 12 40611193 40615223 Gso12g0875 12 9808159 9811268 PCT
Gso12g1702 12 40611193 40615223 Gso6g2450 6 46192826 46195958 PCT
Gso12g0875 12 9808159 9811268 Gso12g1702 12 40611193 40615223 PCT
Gso6g2450 6 46192826 46195958 Gso12g1702 12 40611193 40615223 PCT