Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0875 ATGGCGGTGGAGAGTGACAAAACGGGTTCTGTTGGGAAAGGTTGGAGCTTTTGCAGCATGCCATTTTGGCAAACAACTCATGCTTCTTCAACTTCTTCAACAACAACTTTTTCTATGCATCATAGCGTTCACCATCAGAGCCAGATTCTTCAGTCTCTTGATAGATCCACCCATCAACCTTCCACCACTGTTTCTTCTGTGGCCAAGTCTCTTCTGCCCACAAGGAGAAGGCTCCGTCTTGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAACAAGTTAGGAGCGCCATCGCAATTAAAAACACTTGCAAGTCTCATGTCGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCGGGTGGTATTCTTGCACCTGGTGAAAGTATAATTGCAACTGTGTTTAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAGAAAAGCAGGGTTAAGTTTAAAATCATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGATGAGCAAAGGGATCATGTAGCTGTGGAGCAAATTTTGCGTGTCATTTTTCTGGACCCTGAACACCCTTGCCCTGCTTTGGATAAGCTTAAACGGCTGCTAGCTGAGGCTGAGGCTGCATTGGAAGCAAGAAAGAAGCCCCCAGAGGAGACAGGTCCTCGAGTAGCTGGGGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCCAGACAGCAGGTTGAAGTGGTAGATTCTGTGTAA 798 0.4511 MAVESDKTGSVGKGWSFCSMPFWQTTHASSTSSTTTFSMHHSVHHQSQILQSLDRSTHQPSTTVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDHVAVEQILRVIFLDPEHPCPALDKLKRLLAEAEAALEARKKPPEETGPRVAGEGLVIDEWKERRERYLARQQVEVVDSV* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0875 265 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 34 264 IPR016763 GO:0005789
Gso12g0875 265 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 34 264 - -
Gso12g0875 265 SUPERFAMILY PapD-like 66 204 IPR008962 -
Gso12g0875 265 Pfam MSP (Major sperm protein) domain 78 188 IPR000535 -
Gso12g0875 265 Gene3D Immunoglobulins 73 203 IPR013783 -
Gso12g0875 265 ProSiteProfiles Major sperm protein (MSP) domain profile. 77 199 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0875 Gso-Chr12 9808159 9811268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0875 - - gmx:100820576 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0875 12 9808159 9811268 Gso12g0875 12 9808159 9811268 ECH
Gso12g0875 12 9808159 9811268 Gso6g2450 6 46192826 46195958 GST
Gso12g1702 12 40611193 40615223 Gso12g0875 12 9808159 9811268 PCT
Gso11g3166 11 47491321 47495133 Gso12g0875 12 9808159 9811268 PCT
Gso12g0875 12 9808159 9811268 Gso12g1702 12 40611193 40615223 PCT
Gso12g0875 12 9808159 9811268 Gso11g3166 11 47491321 47495133 PCT