Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2437 ATGAGTCGCTACGATCCCAATCCCTTCGACGAAGAACCGGTCGAGGTTAATCCCTTCGCGGATGGAGCAGCTAAAGGAAAAGGCTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACTAACACTGGAAGTGTTCCCTCCTCAAACTCAAGGCTCTCACCCCTTCCACCAGAGCCTTATGATCGTGGGGCAACTATTGACATCCCCCTAAATAATGCAAAGGACGCAAAAGCAAAGGAGAAGGAACTTCAAGCTAAAGAGGCTGAATTGAAAAGAAGGGAACAGGAACTAAAACGAAGGGAAGATGCTATAGCACGAGCTGGAATAGTTATAGAGGAGAAAAATTGGCCACCTTTTTTCCCCATCATTCATCATGACATTGCAAAGGAAATACCAGTACATCTTCAAAGGATCCAGTACATTGCATTTACAACATGGTTGGGTTTGGTTCTGTGTCTTTTGTGGAATATTGTGGCAGTTACTACTGCTTGGATCAAAGGAGAAGGTCCAACCATCTGGTTTCTTGCTATTATCTATTTTATTTCTGGTGCTCCAGGATCCTATGTGTTGTGGTATCGCCCTCTTTATCGTGCTATGAGGACTGACAGTGCTCTGAAATTTGGCTGGTTCTTCTTGCTTTACATGTTGCACATTGCCTTTTGCATTTTAGCTGCAGTTGCTCCACCAATTATCTTCAAAGGAAAATCTCTCACAGGCATTTTGGCTGCGATTGATGTGTTGGGAGACAATGCATTGGTTGGGATATTCTACTTCATTGGATTTGGCCTTTTCTGTCTCGAGTCAGTGCTGAGCATCTGGGTTATACAGCAAGTATATATGTACTTCCGTGGCAGTGGCAAGGCTGCAGTTTTAAAGCGTGAGGCTGCGAGAGGGACAATGATGGCAGCTCTATGA 921 0.443 MSRYDPNPFDEEPVEVNPFADGAAKGKGSGQSSYSGGAFYTTNTGSVPSSNSRLSPLPPEPYDRGATIDIPLNNAKDAKAKEKELQAKEAELKRREQELKRREDAIARAGIVIEEKNWPPFFPIIHHDIAKEIPVHLQRIQYIAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMRTDSALKFGWFFLLYMLHIAFCILAAVAPPIIFKGKSLTGILAAIDVLGDNALVGIFYFIGFGLFCLESVLSIWVIQQVYMYFRGSGKAAVLKREAARGTMMAAL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2437 306 Coils Coil 73 105 - -
Gso6g2437 306 MobiDBLite consensus disorder prediction 1 68 - -
Gso6g2437 306 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 306 - -
Gso6g2437 306 Pfam SCAMP family 115 286 IPR007273 GO:0015031|GO:0016021
Gso6g2437 306 MobiDBLite consensus disorder prediction 28 53 - -
Gso6g2437 306 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 306 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2437 Gso-Chr6 46064778 46071344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2437 3 306 Miscellaneous Gene Families AT1G11180 68.489 1.52e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2437 K19995 - gmx:100814913 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0887 12 9956783 9963693 Gso6g2437 6 46064778 46071344 GST
Gso12g1709 12 40671199 40676461 Gso6g2437 6 46064778 46071344 PCT
Gso11g3156 11 47425621 47431039 Gso6g2437 6 46064778 46071344 PCT
Gso6g2437 6 46064778 46071344 Gso12g1709 12 40671199 40676461 PCT
Gso6g2437 6 46064778 46071344 Gso11g3156 11 47425621 47431039 PCT