Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2391 ATGGACCAACAATTCTATGAAGAGGTTCAAGAGCCAGTGAGTCCTCCAGGACAATATTTCAACAGCTCGGTGATATGTTCCTATGTTTTTGGCTTTCTTGAGATGGCAGTTCCAATTGATGACTCACAGACTATACCTTTGCTTAAAGATGTCTTCCTCCCTATCAACCCACGTTTCTCTTCTATTATGGTGAGAGACCAAGATGGTAGAATGAAATGGAAAAGGGTACAAGTGAAGCCTGAAGAGCATGTAAAGGTTCCCAAATTTCCTGAATGCAATTCACCTGAATTATATGACCAATATTTTGGTGACTACGTGACAAGGATTCTAACTGAACGGACACCTCAAAACAAACCACTATGGGAAATCCATATTATTAATTATCCAACAAGCAATGCTGCAGGCACATTAATTTTCAAGCTTCATCATGCGCTTGGAGATGGTTATTCTCTTATGGGTGCTCTTCTTTCTTGTCTTCAAAGAAGTGATGATCCTTCTCTTCCACTAACTTTTCCTTCAAGAACATCATCAAATTCACAGCAAGCAAAGAAAAGCATGTTTAAGAAGTTACCTTCATTTATATCCTCCTTTTTTAACTCCATGTCAGATTTTGGATCTAGCTTAATAAAGACAAGAATGATTGTAGATGACAAAACACCCATAAGGTCTGGATATGAAGGAACTGAGTCTATGCCTTTCACCTTGTCAAACATATCATTATCTATTGACAATATCAAAGCAATCAAGTCCAAGCTTGGAGTGACAATAAATGATGTGATTACTGGCTTGATTTTCTATGGGATTCGATTGTACATGCAAGAGATTGACCGCATGGCTAGAAAAGCAAATTCCACATGTGTGGTAATGCTTAACACAAGAAATGTTAGAGGGTACCAATCAGTGAAGGAGATGCAAAAATCAAAAGTCAAAGGTCTTTGGGGGAATAAAATTTCTTTCTTACAAGTACCAATTCCAAAGCTAGGCCAATCCAAAATCTCCAACCCTCTTGAGTTTATTTGGAATGCTCGTAAACAAATCAAGAAGAAGAGACGTTCTTTCAGTGTTTATCTCATAGGTCTGCTCTTGGATTTGGAGATGAAAATAAGAGGCCCTGAGGCTGTTGCTAAAATCATCTACAAGACTCTGCGAAACTCTAGTGTTGTTATATCCAACCTTTTTGGGCCAATGGAACAAATGACTTTGGCAAATCATCCAATAAGTGGTCTGTATTTCACCATGACTGGTGGACCTGAGAATGTAGACATAACAATTATGAGCTATGTGAAAGTAATAAGAATCACCTTGAGAACACTAAAGGGATTCGTTGATGAACAGAAATTCAAGTTTTGCATAGAGAAAGCCTATGATGTCATGTTCAAAGCTGCTATGGAGATCTCTGAGACACCCAACAAAAATTAA 1419 0.3798 MDQQFYEEVQEPVSPPGQYFNSSVICSYVFGFLEMAVPIDDSQTIPLLKDVFLPINPRFSSIMVRDQDGRMKWKRVQVKPEEHVKVPKFPECNSPELYDQYFGDYVTRILTERTPQNKPLWEIHIINYPTSNAAGTLIFKLHHALGDGYSLMGALLSCLQRSDDPSLPLTFPSRTSSNSQQAKKSMFKKLPSFISSFFNSMSDFGSSLIKTRMIVDDKTPIRSGYEGTESMPFTLSNISLSIDNIKAIKSKLGVTINDVITGLIFYGIRLYMQEIDRMARKANSTCVVMLNTRNVRGYQSVKEMQKSKVKGLWGNKISFLQVPIPKLGQSKISNPLEFIWNARKQIKKKRRSFSVYLIGLLLDLEMKIRGPEAVAKIIYKTLRNSSVVISNLFGPMEQMTLANHPISGLYFTMTGGPENVDITIMSYVKVIRITLRTLKGFVDEQKFKFCIEKAYDVMFKAAMEISETPNKN* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2391 472 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 100 260 IPR004255 GO:0004144|GO:0045017
Gso6g2391 472 Pfam WS/DGAT C-terminal domain 313 458 IPR009721 GO:0004144
Gso6g2391 472 PANTHER O-ACYLTRANSFERASE WSD1-LIKE PROTEIN 5 471 - -
Gso6g2391 472 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 5 471 IPR045034 GO:0008374|GO:0045017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2391 Gso-Chr6 45519202 45522736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2391 10 435 Acyl Lipid Metabolism Gene Families AT5G53390 28.894 8.17e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2391 - - gmx:100804395 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0948 12 11416196 11420297 Gso6g2391 6 45519202 45522736 GST
Gso11g3122 11 47119251 47123451 Gso6g2391 6 45519202 45522736 PCT
Gso6g2391 6 45519202 45522736 Gso11g3122 11 47119251 47123451 PCT