Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3122 ATGAACTGCTTTGAGGAAGTTGTTCCAACGCCTCTGAGTCCTATGGCAGATTACTTGAGCAGCTCTTTGATAAACGTATTCGTTCTTGGTGTTCTTGAATCTGAGATTCCCATTGATGATTCAAGAGCCGAACCTCTGCTTAAGAACGCGTTCCTTCCCATCTCCACGCGCTTCTCTTCTATCTTGGTTATGGACAAGAAGGGAAACAAAGGATGGAAACAAGTTGATGTTAATGTGAAGGAACACATCAAGATTCCTACATTTACATATGCCATGCCACTCAAATTATACGACGAGTGTCTTGATGAATACATGTCAAAAATAGCTATGGAACAGTTACCACTAGATAAACCGCTTTGGGAAATGCATATATTCAAGTATCCAACAAGCAATGCTGCGGGAACTTTTATATTTAAGCTCCATCATGCACTTGGAGATGGCTACTCTTTCATGACAACTTTGCTTTCATGCGTGCAAAATGCTGAGAATCCTTCTGTTCCTATAAAATTTCCTTCGAGCCGATCAGTGGAATCAAAAAGTACCAAAATCATGCCAAAATTATTACCTCAAACTGTCTCTATGGTGTTTAAGAGTGCATTCGATTTTGGATGGAGTCTGTTAAAAGATAGCCTGATTCCAGATGATCAAACACCAATAAGGTCAGGTCATAAAGATGTAGGGTTTCGACCTATGAGTGTCACAGATGTTTCTCTCTCTCTGGGTAACATCAAAGAAGTTAAAGATAAACTCAAAGTGAGCGTAAATGATGTCTTGGTTGGGGTAATTTTCCTTGGCATTCAACTATACATGAGTGCAAAGAACCATAAATCAAGCAGAGCAGAGAGTACAGCATTGGTGCTGCTCAATACCAGGAAAATTAGAGCTTACAAATCTGCGGAGATGATGGATCATACCAATTCCGAGGCACCTTGGGGGAATAGATTCCACTTCATGCATGTTCCCATGCCTATGTTAAGTGATACCAATTACTTGAACCCACTTGAGTATGTGTTAGAAGCCAACAAAAATATCAACAGGAAGAGAAATTCTTTGGCCGTACCGTTGACCGGAGTGCTTTTGCGCTTGTTGAACAAAATCAGAGGCCCACAGGCTGCTACAAACTACGTGTACAAGATATTGAATAATACAAGTTTAAGCATCTCACACATGGTTGGACCAATGGAAAAAGTGGCTTTGGCTAACCATCCTATCAAAGGCTTATACTTCATGACTGTTGGTTTATCTCAGAGCATCACAGTGACTATAACAAGTTACATGGGATATTTGCGAGTTGGATTTGGAGTAGAGGAAGGCTTCATAGACGAATACCAGCTCAAGTCATGTTTCGAAACCTCTCTGGAGATGATACTGAAAGCAGCAAAAAATGTTGCGAAAACTAGATTATAG 1407 0.4037 MNCFEEVVPTPLSPMADYLSSSLINVFVLGVLESEIPIDDSRAEPLLKNAFLPISTRFSSILVMDKKGNKGWKQVDVNVKEHIKIPTFTYAMPLKLYDECLDEYMSKIAMEQLPLDKPLWEMHIFKYPTSNAAGTFIFKLHHALGDGYSFMTTLLSCVQNAENPSVPIKFPSSRSVESKSTKIMPKLLPQTVSMVFKSAFDFGWSLLKDSLIPDDQTPIRSGHKDVGFRPMSVTDVSLSLGNIKEVKDKLKVSVNDVLVGVIFLGIQLYMSAKNHKSSRAESTALVLLNTRKIRAYKSAEMMDHTNSEAPWGNRFHFMHVPMPMLSDTNYLNPLEYVLEANKNINRKRNSLAVPLTGVLLRLLNKIRGPQAATNYVYKILNNTSLSISHMVGPMEKVALANHPIKGLYFMTVGLSQSITVTITSYMGYLRVGFGVEEGFIDEYQLKSCFETSLEMILKAAKNVAKTRL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3122 468 Pfam WS/DGAT C-terminal domain 311 456 IPR009721 GO:0004144
Gso11g3122 468 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 7 462 IPR045034 GO:0008374|GO:0045017
Gso11g3122 468 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 91 257 IPR004255 GO:0004144|GO:0045017
Gso11g3122 468 PANTHER O-ACYLTRANSFERASE WSD1-LIKE 7 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3122 Gso-Chr11 47119251 47123451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3122 11 468 Acyl Lipid Metabolism Gene Families AT3G49190 27.984 1.86e-50 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3122 - - gmx:100802957 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3122 11 47119251 47123451 Gso12g0948 12 11416196 11420297 PCT
Gso11g3122 11 47119251 47123451 Gso6g2391 6 45519202 45522736 PCT
Gso12g0948 12 11416196 11420297 Gso11g3122 11 47119251 47123451 PCT
Gso6g2391 6 45519202 45522736 Gso11g3122 11 47119251 47123451 PCT