Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1879 ATGATGGAGCCCAGCAAACACCACCAACGCCACCAGAACAAGACCAAGAAAAAGTGGTTCCTCCCACTAATCCTCTCCCTCCTCATATCCACCTTCCTCATCCTCCTCTCCGTCATCGTTTCCTCCAACTCACCCTCCCAGCGGTGGCACCACCATCACCGAGCCCCAGTCCCAAAGGAAGTGGTGCCCCGTTTCGTCGAGTCCAAGCTGAAGATAAGTCCCACATCGACCCACTTGGTTCCGAGAATCGCGTATTTAATCTCGGGCTCAATGGGAGACGGTGAAAGTCTCAAAAGGACGCTGAAGGCTTTGTACCATCCTTTAAACCACTACGCAGTGCACTTGGACCTCGAGGCCTCTTCCAAGGAGAGGTTGGACCTCGCCAATTTCGTTAGGAACGAGCCTCTCTTTGAGAAGTTCGGGAATGTTAGAACGGTGGTTAAGGCTAACTTGGTAACTTATAGAGGCCCCACTATGGTGACTAATACCCTTCAGGCTGCGGCCATTTTGTTGAACGAAGCTCAGGATTGGGATTGGTTCATTAATTTGAGTGCTTCTGATTATCCTTTGGTAACCCAAGATGATCTGCTGCATACGCTTTCTTCTATTCCCAGACACCTGAATTTCATTGAACACACCAGTGATATTGGTTGGAAGGAGTATCACAGGGCCAAGCCAGTTATAATTGATCCAGGCCTTTATAGCGTGAATAAATCTGATGTATTTTGGGTATCGGAGAAAAGAAATGTACCCACAGCTTATAAATTGTTTACAGGTTCTGCCTGGATGATGCTCTCTCGCCCATTTATTGAATACTGTATATGGGGGTGGGACAACTTACCTAGAATAGTCTTGATGTATTATGCCAACTTTCTGTCTTCCCCGGAAGGGTATTTTCACACAGTCATCTGCAATGCTGACGAGTTTCGAAACACTACCGTTAATCACGACCTCCACTTCATATCATGGGACAACCCTCCAAAACAACACCCGCATTTTCTTACAGTTGATGACTACCAGAAAATGGTGGACAGCAATGCTCCTTTTGCTAGGAAATTTGGCAGGAACGAACCAGTCTTGGATAAGATTGATACTGAACTCTTGGGACAAAATGCAGTTGGTTATGTTCCTGGCAGGTGGTTCAGTCAAGCAAATTCAAGCATCACTAATAAGTATTCTGGCATAAGAAATATCACTGACCTAAGGCCTGGCCCTGGAGCTGAAAGGCTTGGACGCCTTATCAATGGTTTATTATCAGCAGAAAATTTTCACGCAAATCAGTGTTCTTGA 1290 0.4605 MMEPSKHHQRHQNKTKKKWFLPLILSLLISTFLILLSVIVSSNSPSQRWHHHHRAPVPKEVVPRFVESKLKISPTSTHLVPRIAYLISGSMGDGESLKRTLKALYHPLNHYAVHLDLEASSKERLDLANFVRNEPLFEKFGNVRTVVKANLVTYRGPTMVTNTLQAAAILLNEAQDWDWFINLSASDYPLVTQDDLLHTLSSIPRHLNFIEHTSDIGWKEYHRAKPVIIDPGLYSVNKSDVFWVSEKRNVPTAYKLFTGSAWMMLSRPFIEYCIWGWDNLPRIVLMYYANFLSSPEGYFHTVICNADEFRNTTVNHDLHFISWDNPPKQHPHFLTVDDYQKMVDSNAPFARKFGRNEPVLDKIDTELLGQNAVGYVPGRWFSQANSSITNKYSGIRNITDLRPGPGAERLGRLINGLLSAENFHANQCS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1879 429 PANTHER BETA-GLUCURONOSYLTRANSFERASE GLCAT14B-LIKE 14 428 - -
Gso6g1879 429 Pfam Core-2/I-Branching enzyme 83 342 IPR003406 GO:0016020|GO:0016757
Gso6g1879 429 PANTHER GLYCOSYLTRANSFERASE 14 428 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1879 Gso-Chr6 27164013 27167688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1879 9 428 Glycosyltransferase AT5G15050 63.023 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1879 K20891 - gmx:100780840 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1231 4 29088831 29097868 Gso6g1879 6 27164013 27167688 GST
Gso6g1879 6 27164013 27167688 Gso17g0969 17 9117481 9121293 PCT