Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0969 ATGGAGACCAACAACAAACAACAGCAGCAGAAGAAGAAGTGGTTTATGCCACTGGTTCTGTCTCTACTACTGTCCACCCTGCTCATACTTTTTTCCATCTTCGTCTCCTCCGATTCCTCCTCTCTGCTCTACCTCTACCGTACACGTGGCAGACTCGAGGAGCCTCGTTTCGTGGAGTCAAAGCTGAGGCTGTCCGCCACGTCATCCAGCGATTCCGTTCCCAGGATCGCGTACCTGATCTCGGGGTCAATGGGCGATGGCGACACTCTGAAGAGAACCCTCAAGGCCCTTTACCATCCCAGGAACCAATACGCTGTGCACTTGGACCTCGAAGCTTCTTCTCAAGAAAGATTGGAGCTTGCAAACTTTGTGAAGAACGACCCTCTCTTTGCGGAAGTGGGCAATGTTAGGATGATTGTTAAGGCCAACTTGGTTACTTATAGAGGACCCACTATGGTCACTAATACCCTCCACGCTGCTGCCATTCTGTTAAAGGAAGGTGGACTCTGGGATTGGTTCATCAATCTCAGCGCTTCCGATTACCCTTTGATCACTCAAGATGATCTGCTGCATACACTGTCATCAATTCCAAGACACCTTAACTTTATTGAGCACACCAGTGATATTGGCTGGAAGGAAGATCAGAGAGCCAAGCCTGTTATCATTGATCCAGCTCTTTATAGTGTCAATAAGTCTGATTTATTTTGGGTGACTGAGAAAAGAAATGTTCCCACCGCTTATAAGCTGTTTACAGGTTCTGCATGGATGATGCTCTCTCGCCAATTTGTTGAATATTTGTTATGGGGATGGGATAACTTGCCTAGAATTGTCTTGATGTATTATGCCAACTTTCTATCCTCCCCTGAAGGGTATTTTCACACTGTCATCTGCAATTCTGAGGAGTTCCGAAACACTACTGTGAACCATGACCTCCACTTCATATCATGGGACAACCCTCCAAAACAACATCCACATTTCCTTACAATTGATAACTACGAGCAAATGGTTGACAGCAATGCTCCGTTTGCTCGAAAATTTGGCAGGAATGAACCACTCTTGGATAAGATTGATAATGAACTCTTGAGACGAAATGAACATGGTTATGTGCCTGGCAGGTGGTTCGACCAAGCAAATCCTAACATCACCAAACCATATTCTGCCATAAGAAATATCACTGAACTTAAGCCTGGCCCTGGAGCAGAAAGGCTTAAACGCCTTATCAATGGTTTGTTATCATCAGAAGATTTTCACACTAAGCAGTGTTCTTGA 1269 0.4523 METNNKQQQQKKKWFMPLVLSLLLSTLLILFSIFVSSDSSSLLYLYRTRGRLEEPRFVESKLRLSATSSSDSVPRIAYLISGSMGDGDTLKRTLKALYHPRNQYAVHLDLEASSQERLELANFVKNDPLFAEVGNVRMIVKANLVTYRGPTMVTNTLHAAAILLKEGGLWDWFINLSASDYPLITQDDLLHTLSSIPRHLNFIEHTSDIGWKEDQRAKPVIIDPALYSVNKSDLFWVTEKRNVPTAYKLFTGSAWMMLSRQFVEYLLWGWDNLPRIVLMYYANFLSSPEGYFHTVICNSEEFRNTTVNHDLHFISWDNPPKQHPHFLTIDNYEQMVDSNAPFARKFGRNEPLLDKIDNELLRRNEHGYVPGRWFDQANPNITKPYSAIRNITELKPGPGAERLKRLINGLLSSEDFHTKQCS* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0969 422 Pfam Core-2/I-Branching enzyme 76 335 IPR003406 GO:0016020|GO:0016757
Gso17g0969 422 PANTHER BETA-GLUCURONOSYLTRANSFERASE GLCAT14B-LIKE 9 421 - -
Gso17g0969 422 PANTHER GLYCOSYLTRANSFERASE 9 421 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0969 Gso-Chr17 9117481 9121293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0969 1 421 Glycosyltransferase AT5G15050 62.911 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0969 K20891 - gmx:100790174 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0969 17 9117481 9121293 Gso17g0969 17 9117481 9121293 ECH
Gso4g1231 4 29088831 29097868 Gso17g0969 17 9117481 9121293 PCT
Gso6g1879 6 27164013 27167688 Gso17g0969 17 9117481 9121293 PCT