Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1231 ATGGAACCCAACAAGCACCACCAACAACACCAGAACAAGACCAAGAAAAAATGGTTCCTCCCACTCATCCTCTCTCTCCTCATCTCCACCTTCCTCATCCTCCTCTCCGTCTTCGTTTCCTCTAACTCACCCTCCCAGCGGCACCGCCGCGCCCCAGTTCCAAAAGAAGTGCCACATTTCGTTGAGTCCAAGCTGAAGGTAAGTCCCACATCGGCCAACCTGGTTCCGAGAATCGCGTATTTAATCTCTGGCTCAATGGGAGACGGTGAAAGCCTGAAAAGGACGCTGAAGGCTCTGTACCATCCGTGGAACCACTACGCGGTGCACTTGGACCTCGAGGCCTCTTCCAAGGAGAGGTTGGACCTCGCCGATTTCGTGAAGAACGAGCCTCTGTTTGAGAAATTCGGGAACGTTAGAACGGTGGTTAAGGCCAACTTGGTTACTTACAGAGGACCCACTATGGTCACTAATACCCTTCACGCCGCTGCTATTTTGTTGAACCAAGCTGGGGACTGGGATTGGTTCATTAATTTGAGTGCTTCTGATTATCCTTTGGTAACCCAAGATGATCTGCTGCATACGCTTTCGTCTATTCCCAGACACCTGAACTTCATTGAACACACCAGTGATATTGGTTGGAAGGTGTATCATAGAGCCAAGCCAGTTATAATTGATCCTGGCCTATATAGCGTGAATAAATCTGATGTATTTTGGGTATCACAGAAAAGAAATGTACCCACTGCTTATAAACTTTTTACAGGTTCTGCCTGGATGATGCTCTCTCGCCCATTTATTGAATACTGTATATGGGGTTGGGACAACTTACCCAGAATAGTCTTGATGTATTACGCCAACTTTCTGTCTTCCCCCGAAGGGTATTTTCACACAGTCATCTGCAATGCCGAGGAGTTTCGTAACACTACCGTTAATCATGACCTCCACTTCATATCATGGGACAACCCTCCTAAACAACACCCACATTTTCTTACAGTTAATGACTACCAGAGAATGGTGGACAGCAATGCTCCATTTGCTAGGAAATTTGGCAGGAATGAACCAGTCTTGGACAAGATTGATACTGAACTCTTGGGACAAAATGCAGATGGTTATGTTCCTGGCAGGTGGTTCAGTCAGGCAAATTCAAGCATCACTAAACAGTACTCCGGCATAAGAAATATCACTGACCTAAGGCCTGGCCCAGGAGCTGAAAGGCTTGGACACCTTATAAATGGTTTATTATCAGCAGAAAATTTTCAGGCAAATCGGTGTTTTTGA 1275 0.4627 MEPNKHHQQHQNKTKKKWFLPLILSLLISTFLILLSVFVSSNSPSQRHRRAPVPKEVPHFVESKLKVSPTSANLVPRIAYLISGSMGDGESLKRTLKALYHPWNHYAVHLDLEASSKERLDLADFVKNEPLFEKFGNVRTVVKANLVTYRGPTMVTNTLHAAAILLNQAGDWDWFINLSASDYPLVTQDDLLHTLSSIPRHLNFIEHTSDIGWKVYHRAKPVIIDPGLYSVNKSDVFWVSQKRNVPTAYKLFTGSAWMMLSRPFIEYCIWGWDNLPRIVLMYYANFLSSPEGYFHTVICNAEEFRNTTVNHDLHFISWDNPPKQHPHFLTVNDYQRMVDSNAPFARKFGRNEPVLDKIDTELLGQNADGYVPGRWFSQANSSITKQYSGIRNITDLRPGPGAERLGHLINGLLSAENFQANRCF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1231 424 PANTHER GLYCOSYLTRANSFERASE 13 423 IPR044610 GO:0015020
Gso4g1231 424 PANTHER BETA-GLUCURONOSYLTRANSFERASE GLCAT14B-LIKE 13 423 - -
Gso4g1231 424 Pfam Core-2/I-Branching enzyme 78 337 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1231 Gso-Chr4 29088831 29097868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1231 8 423 Glycosyltransferase AT5G15050 63.744 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1231 K20891 - gmx:100820204 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1231 4 29088831 29097868 Gso6g1879 6 27164013 27167688 GST
Gso4g1231 4 29088831 29097868 Gso17g0969 17 9117481 9121293 PCT