LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso6g1533	ATGGCTACTCAATCCCCTTCACCTCAGAACCTAGGTGGTGAAATTGAGCAAACAGAAAATGTAGATCAGCATAATAGGGGAGAAGAGCTTGGTAAACAGAGTTCAGACACATCGGTGTTTGTGAACTCAGAGCCATTGCGTGAGGAACAAATTCAGAATGCTGTGAAATTTCTGTCACACCCGAAAGTTAGAGGTTCTCCTGTCATCCACAGACGATCGTTTCTGGAGAAGAAGGGCCTTACGAAGGAGGAGATTGATGAAGCCTTTCGGCGTGTGCCTGATTCACCTCCAAGTGTGCAGACAGCTGGCATAAATCAAGATGGACAATTGAAGCCATCATCAAACATTCAGCAGCAAGGCCAACCACAGGCTTTGCAGCTGACTGTACCAGCTTCTACTGGTGTTACTACTACGCTTGGAACCTTATCTCGCCGCAGTTTTCACTGGTCACATGCCCTTATTGCAGTTGGATTACTGGCTGCTTCAGGTGCTGGTACAGTTATAGTAATTAAGAATTCTATTCTCCCTCGGTTAAAATCCTGGATACGCAATGTTGTCCTAGAAGAGGGTCATGATCAATCAAAGAGAACAGGCTCAAAACCAACATTGGCAGAAGAAGCTGCACAGGCTGCAAAAGCAGCTGCAGTCGCAGCTGCTGATATTGCAAAAGCAAGCCAAGAATTACTGAGTTCAAAAATTGAAGAGAAGAGATATTTTGTAGAAGTTGTGAACCTTTTGGATAAGCAAGTGCAGGAAATGAAGTTGATGACTAATGCAATAGGAAGATTGGAAGCTTCTGGTGGACTCTCTGTCTCAAAGCAAGAAGACCGCTTAGTCACTCAAACAGGTTCAAAGCAACTGATCGTGAATGGGAAGTCAGACTATGAGTCCCGATCAGTGAGATCTTCATCCCCTCCTGTATCTGTTGAACCATCTAGTGCTCCTCATCCTAAATCATATATGGAGATAATGGCCATGATCCAACGAGGGGAGAAGCCTTCTAACATTAGGGAAATTGATGATTCAGCCCCCAACCCTTATCAGCAACCATCAAATCCTCGCTTAGCACCTAGAGCCAAGCCTTGGGAGGTTAGTCAGGTGCAAAACACCTCAACCCAAGTCCTTCCGTATCAAGTAAATGGCAAGATCCAAGATAATGGTGACAACACAGTACCCTGGTGGCAAACAAAGAACGTCAGAATCAAAGAGATCGATAATGAAATTGAGTATAATGGAGCACCTGCTGCATCCAGTCCGCAGCCAGTCCAACGAGCGTGGGTTCCTCCTCAGCCTCCTCCTATAGCAATGCCAGAGGCTGCAGAAGCGATCAGACGCCCAAAGCAGGTAGTCCAAAAGGAAGTGACACTGGATGATCAGTCAGCAGCTCATTCTTCAGACCTCACTAATGGATCCAAATCCGAAGATGCAATAGAAGGCAACGTTGTCAACTCACTTGTCAGCTCTGGTGAGATCCAAAACCATGAAGTTGGTTACGAAGAGAAATGA	1506	0.4568	MATQSPSPQNLGGEIEQTENVDQHNRGEELGKQSSDTSVFVNSEPLREEQIQNAVKFLSHPKVRGSPVIHRRSFLEKKGLTKEEIDEAFRRVPDSPPSVQTAGINQDGQLKPSSNIQQQGQPQALQLTVPASTGVTTTLGTLSRRSFHWSHALIAVGLLAASGAGTVIVIKNSILPRLKSWIRNVVLEEGHDQSKRTGSKPTLAEEAAQAAKAAAVAAADIAKASQELLSSKIEEKRYFVEVVNLLDKQVQEMKLMTNAIGRLEASGGLSVSKQEDRLVTQTGSKQLIVNGKSDYESRSVRSSSPPVSVEPSSAPHPKSYMEIMAMIQRGEKPSNIREIDDSAPNPYQQPSNPRLAPRAKPWEVSQVQNTSTQVLPYQVNGKIQDNGDNTVPWWQTKNVRIKEIDNEIEYNGAPAASSPQPVQRAWVPPQPPPIAMPEAAEAIRRPKQVVQKEVTLDDQSAAHSSDLTNGSKSEDAIEGNVVNSLVSSGEIQNHEVGYEEK*	502

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso6g1533	501	MobiDBLite	consensus disorder prediction	449	501	-	-
	Gso6g1533	501	MobiDBLite	consensus disorder prediction	282	316	-	-
	Gso6g1533	501	Gene3D	-	39	101	IPR036388	-
	Gso6g1533	501	MobiDBLite	consensus disorder prediction	336	359	-	-
	Gso6g1533	501	MobiDBLite	consensus disorder prediction	453	491	-	-
	Gso6g1533	501	MobiDBLite	consensus disorder prediction	1	18	-	-
	Gso6g1533	501	Pfam	Family of unknown function (DUF5572)	315	364	-	-
	Gso6g1533	501	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE	16	469	-	-
	Gso6g1533	501	Pfam	Pex14 N-terminal domain	47	91	IPR006785	-
	Gso6g1533	501	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14	16	469	IPR025655	GO:0005515\|GO:0005778\|GO:0016560
	Gso6g1533	501	MobiDBLite	consensus disorder prediction	282	309	-	-
	Gso6g1533	501	MobiDBLite	consensus disorder prediction	92	122	-	-
	Gso6g1533	501	MobiDBLite	consensus disorder prediction	1	44	-	-
	Gso6g1533	501	MobiDBLite	consensus disorder prediction	98	122	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso6g1533	Gso-Chr6	15716858	15722060	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso6g1533	K13343		-	gmx:100807229	872.078

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso5g0313	5	3261838	3269050	Gso6g1533	6	15716858	15722060	PCT
	Gso17g0757	17	7000968	7007305	Gso6g1533	6	15716858	15722060	PCT
	Gso6g1533	6	15716858	15722060	Gso5g0313	5	3261838	3269050	PCT
	Gso6g1533	6	15716858	15722060	Gso17g0757	17	7000968	7007305	PCT