Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0313 ATGGCCACCCAATCTCCGCCTCCTCCCACTCCCACCGCCACCGACCAAAACCAAGGTTCTGAAGTTGTGCAAGCAACAAATGTGGATCAGCAAAATGCCAGAGAAGAGCCAGCTAAACAGAGTTCAACTACATCAGTCTTTGTGAACTCACAACCAATGCGGGAAGAACAAATTCAGAATGCTGTGAAATTTCTATCACACCCAAAAGTTAGAGGTTCACCTGTCATGTATAGGCGATCATTTCTAGAGAAGAAGGGCCTTACGAAGGAGGAGATTGATGAAGCCTTTCAGCGTGTTCCAGATTCAGCTCCAACTGTGCAGACAGGTGGTGTAAATCAAGATGGGCAATTGAAATCATCATCAAACATTCAGCAACAAGCCCAACAACAAACTTTGCAGCCGGGTTTACCTGCTTCTACTGGTGTTAATACTTCATCGGGAACCTTATCACGCTCCAGATTTCACTGGTCCCATGCCCTTATTGCAGTTGGATTACTGGCTGCTTCAGGTGCTGGAACAGCTATAATAATTAAGAATTCTGTTCTCCCTCGGTTAAAATCTTGGATACGTAAGGTTGTCTTAGACAGTGATGATGAACAATTAAAGAAAACTGACAACAAACCAACACCGATGGAAGAAGCTGTGCAAGCTGCAAAATCAGCTGCAGCTGCAGCTGCAGATGTGGCAAAAGCGAGCCAAGAAATGCTGGCTTCAAAAGGCGAAGAGAGGAGATACTTTGTGGAAGTTGTGAGCCTTTTAGATAAGCAAGTACAAGAAATGAAGTCAATGACCAATGCCATAAGAAGGTTGGAAGGGCAAGAAGATCTTCGAATCAGTCAAACAAGTTCAAAGCAACTGATTGTGAATGGAAAAGCAGACTACGACATGAGTTCAGTGAGATCTTCATCCCCACCTACATCTGTTGAACCATCAAGTGGTCTTCATCCAAAGGCATATGCGGAGATAATGGCCATGGTCCAAAGAGGAGAGAAGTCTTCTAATATTAAGCATCGGGAGGTTAGTCAGGTGCAAAGCACATCTACCCAGATGCTTCAGTCTCAAGTAAATGGTGAAGACTTGAATACCAAGGCCCTGGATGCCCCTCTATTAAATGGGGATGACCCATTACCCTGGTGGCAGAGGAAAAATGTCAGAATTAGAGAGATTGATAATGAAAATGAGTCTAATGGAGTACCCAATGGTGCTGCATCCAGTCAGCAGCCAATCCAACAGCCAGTTCAACGCGTATGGGTTCCTCCTCAACCTCCCCCCATAGCTATGCCGGAGGCTGCAGAAGCAATCAGGCGGCCAAAGCCAGCGGCCCAAAAGGAACAGATGTCTGATAATCAGTCAGTAGCTCATTCTTTAGACGGTTCCGATGATGTACATATGGACCCAAAACTATTGGAATCTGAAGGTGCAGTTGAGGGAAGCAGTGTCAGCTCGGTTCCCACTTCTAGTGAGATACAAGAGGAGCATGAAGTCAAATATGATGAGAAATGA 1503 0.4531 MATQSPPPPTPTATDQNQGSEVVQATNVDQQNAREEPAKQSSTTSVFVNSQPMREEQIQNAVKFLSHPKVRGSPVMYRRSFLEKKGLTKEEIDEAFQRVPDSAPTVQTGGVNQDGQLKSSSNIQQQAQQQTLQPGLPASTGVNTSSGTLSRSRFHWSHALIAVGLLAASGAGTAIIIKNSVLPRLKSWIRKVVLDSDDEQLKKTDNKPTPMEEAVQAAKSAAAAAADVAKASQEMLASKGEERRYFVEVVSLLDKQVQEMKSMTNAIRRLEGQEDLRISQTSSKQLIVNGKADYDMSSVRSSSPPTSVEPSSGLHPKAYAEIMAMVQRGEKSSNIKHREVSQVQSTSTQMLQSQVNGEDLNTKALDAPLLNGDDPLPWWQRKNVRIREIDNENESNGVPNGAASSQQPIQQPVQRVWVPPQPPPIAMPEAAEAIRRPKPAAQKEQMSDNQSVAHSLDGSDDVHMDPKLLESEGAVEGSSVSSVPTSSEIQEEHEVKYDEK* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0313 500 MobiDBLite consensus disorder prediction 294 313 - -
Gso5g0313 500 MobiDBLite consensus disorder prediction 101 147 - -
Gso5g0313 500 MobiDBLite consensus disorder prediction 14 51 - -
Gso5g0313 500 MobiDBLite consensus disorder prediction 98 147 - -
Gso5g0313 500 MobiDBLite consensus disorder prediction 295 310 - -
Gso5g0313 500 MobiDBLite consensus disorder prediction 392 500 - -
Gso5g0313 500 Gene3D - 42 106 IPR036388 -
Gso5g0313 500 MobiDBLite consensus disorder prediction 393 414 - -
Gso5g0313 500 MobiDBLite consensus disorder prediction 1 51 - -
Gso5g0313 500 Pfam Pex14 N-terminal domain 54 98 IPR006785 -
Gso5g0313 500 Coils Coil 253 273 - -
Gso5g0313 500 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 10 336 - -
Gso5g0313 500 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 339 488 - -
Gso5g0313 500 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 10 336 IPR025655 GO:0005515|GO:0005778|GO:0016560
Gso5g0313 500 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 339 488 IPR025655 GO:0005515|GO:0005778|GO:0016560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0313 Gso-Chr5 3261838 3269050 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0313 K13343 - gmx:100786361 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0313 5 3261838 3269050 Gso17g0757 17 7000968 7007305 GST
Gso5g0313 5 3261838 3269050 Gso6g1533 6 15716858 15722060 PCT
Gso6g1533 6 15716858 15722060 Gso5g0313 5 3261838 3269050 PCT