LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso17g0757	ATGGCCACCCAATCACCGCCTCCTCCCACTCCCACCGCCACCGACCAAAACCAAGGTTCTGAAGTCGTGCAAGCAACAACTGTAGATCAGCAAAATGCCAGAGAAGAGCCTGCTAAACAGAGTTCAACTACATCAGTCTTTGTGAACTCGCAACTGATGCGAGAAGAACAAATTCAGAATGCTGTGAAATTTCTATCACACCCAAAAGTTAGAGGTTCACCTGTCATGTATAGGCGATCATTTCTAGAGAAGAAGGGCCTTACGAAGGAGGAGATTGATGAAGCTTTTCAGCGTGTGCCAGATTCAGCTCCAACAGTGCAGACAGGTGGTGTAAATCAAGATGGCCAATTGAAATCGTCATCAAACATTCAGCAACAAGCCCAACATCAAACTTTGCAGCCGGGTTTACCTGCTTCTACTGGTGTTAATACTTCGCCGGGAACCTTATCACGCTCCAAATTTCACTGGTCTCATACACTTATTGCAGTTGGATTACTGGCTGCTTCAGGTGCTGGAACAGCTATAATAATTAAGAATTCTGTTCTCCCTCGGTTAAAATCTTGGATACGTAAGGTTGTCTTAGACAATGATGATGAACAATTAAAGAAAACTGACAACAAACCGACACTGATGGAAGAAGCTGCGCAAGCTGCAAAATCAGCTGCAGCTGCAGCTGCAGATGTGGCAAAAGCAAGCCAAGAAATGCTGGCTTCAAAAGGTGAAGAGAGGAGATACTTTGTGGAAGTTGTGAGCCTTTTAGATAAACAAGTACAAGAAATGAAGTCAATGACAAATGCCATAAGAAGGTTGGAAGGGCAAGAAGATCTTCAAATCAGTCAAACAAGTTCGAAGCAACTGATTGTGAATGGAAAAGCAGACTACGACTTGCATTCAGTGAGATTTTCATCCCCACCTACATCTGTTGAACCATCAAGTGGTCTTCATCCAAAGGCATATGCGGAGCCTTGGGAGGTTAGTCAGGTGCAAAGCACGTCTACCCAGATGCTTCAGTCTCAAGTAAATGGTGAAGACTTGAATACTAAGGCCCAGGATACCCCTCTAGTAAATGGGGATGACTCATTACCCTGGTGGCAGAGGAAAAATGTCAGAATCAGAGAGATTGATAATGAAAATGAGTCTAATGGAGTACCTTATGCTTCTGCATCCAATCAGCAGCCAGTCCAACGCGTATGGGTTCCTCCTCAACCTCCCCCCATAGCTATGCCGGAGGCTGCAGAAGCAATCAGACGACCAAAACCAGCGGCCCAAAAGGAACAGGTGTCTGATAATCAGTCAGTAGCTCATTCTTTAGACAGCTCTGATGACGTACATATGGCCCCAAAACTATTGGAATCCGAAGGTGCAGTAGAGGGCAGCAGTGTCAGCTCGGTTCCCACCTCTAGTGAGATACAAGAGGAGCATGAAGTCAAATATGATGAGAAATGA	1446	0.4516	MATQSPPPPTPTATDQNQGSEVVQATTVDQQNAREEPAKQSSTTSVFVNSQLMREEQIQNAVKFLSHPKVRGSPVMYRRSFLEKKGLTKEEIDEAFQRVPDSAPTVQTGGVNQDGQLKSSSNIQQQAQHQTLQPGLPASTGVNTSPGTLSRSKFHWSHTLIAVGLLAASGAGTAIIIKNSVLPRLKSWIRKVVLDNDDEQLKKTDNKPTLMEEAAQAAKSAAAAAADVAKASQEMLASKGEERRYFVEVVSLLDKQVQEMKSMTNAIRRLEGQEDLQISQTSSKQLIVNGKADYDLHSVRFSSPPTSVEPSSGLHPKAYAEPWEVSQVQSTSTQMLQSQVNGEDLNTKAQDTPLVNGDDSLPWWQRKNVRIREIDNENESNGVPYASASNQQPVQRVWVPPQPPPIAMPEAAEAIRRPKPAAQKEQVSDNQSVAHSLDSSDDVHMAPKLLESEGAVEGSSVSSVPTSSEIQEEHEVKYDEK*	482

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso17g0757	481	MobiDBLite	consensus disorder prediction	14	45	-	-
	Gso17g0757	481	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE	321	469	-	-
	Gso17g0757	481	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE	10	320	-	-
	Gso17g0757	481	MobiDBLite	consensus disorder prediction	416	481	-	-
	Gso17g0757	481	MobiDBLite	consensus disorder prediction	101	124	-	-
	Gso17g0757	481	Pfam	Pex14 N-terminal domain	54	98	IPR006785	-
	Gso17g0757	481	Gene3D	-	42	106	IPR036388	-
	Gso17g0757	481	Coils	Coil	253	273	-	-
	Gso17g0757	481	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14	10	320	IPR025655	GO:0005515\|GO:0005778\|GO:0016560
	Gso17g0757	481	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14	321	469	IPR025655	GO:0005515\|GO:0005778\|GO:0016560
	Gso17g0757	481	MobiDBLite	consensus disorder prediction	1	45	-	-
	Gso17g0757	481	MobiDBLite	consensus disorder prediction	424	438	-	-
	Gso17g0757	481	MobiDBLite	consensus disorder prediction	100	124	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso17g0757	Gso-Chr17	7000968	7007305	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso17g0757	K13343		-	gmx:100784152	849.351

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso5g0313	5	3261838	3269050	Gso17g0757	17	7000968	7007305	GST
	Gso17g0757	17	7000968	7007305	Gso6g1533	6	15716858	15722060	PCT
	Gso6g1533	6	15716858	15722060	Gso17g0757	17	7000968	7007305	PCT