Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1514 ATGGCGTCAATCTGCGACACCTATATCCCTCTTCGACTACAGAACATCGACGCTTTCACCGCTTCTTACAGAAACTCTCTCCAATCACTGAGAACCACCGCACTCGAAACCGCGCGATCTCAATCCGAACTAACAGAGATTCAAGCTAAACTCAGAGAGGCTGAGGATGATTTGGTAAAGGCACTTGCAGTTAAAACTCGGAGAGAGGCGAAGCGAATGGCGTTGAAAGCCGCGATTGATTCTGTGAAGGGAAGAATTGAAGATCTGAAGACGAGTATTCCGCAGCAGAGAACAAAAAACAAGGAATGTGCTACCGTTGTATCGCAGCACCGGCTTGTTTTGGCAGTGTCTGAACAGGAATCAAATGAAAGCAGTGAGCATAGAGATGAAGTCCAGGAGGCCATATCTTGGTACAATAGGATCCTTGGTTTTCATGTTGAAGGTGGACGTGGGGTAAAATTCACCTTCAAGAATATTAATGTGGACAACCCAAATGAGGAGTTCTTTTTTACCATCCGCCTTGAAGATGACATTTATACATTGCTAAATTGTAAACCATCTGTCAAAGATACTGACGAGGTGATCCATGAATTAAACAAGACAAATGGTCTATTTAAATTTGTCAGAACAATGAGGAAAAAGTTTCAAGAAGCAGTGGCACAAGGCAGTCTATCTATGACAACAAATGAACATCAAGAATCTGCCTTTATGTCTGCATCTGCTCCAGTTTTATCAATATCAACCATTACTGAAGGAAATGAGAATCAAGATGAACCCATCAAAGGCAATGCACATCTCCAGAAACAAGTCAATCGAAGAAGGGTAAAATCTCCTGGATCTGCATCATCTGTTTGTCAATCTCCTCGTTTGAAGGTCAGGAAATGA 885 0.4226 MASICDTYIPLRLQNIDAFTASYRNSLQSLRTTALETARSQSELTEIQAKLREAEDDLVKALAVKTRREAKRMALKAAIDSVKGRIEDLKTSIPQQRTKNKECATVVSQHRLVLAVSEQESNESSEHRDEVQEAISWYNRILGFHVEGGRGVKFTFKNINVDNPNEEFFFTIRLEDDIYTLLNCKPSVKDTDEVIHELNKTNGLFKFVRTMRKKFQEAVAQGSLSMTTNEHQESAFMSASAPVLSISTITEGNENQDEPIKGNAHLQKQVNRRRVKSPGSASSVCQSPRLKVRK* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1514 294 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 12 274 IPR045143 GO:0007059|GO:0031262
Gso6g1514 294 MobiDBLite consensus disorder prediction 273 287 - -
Gso6g1514 294 Pfam Chromosome segregation protein Spc25 149 216 IPR013255 GO:0007059|GO:0031262
Gso6g1514 294 MobiDBLite consensus disorder prediction 253 294 - -
Gso6g1514 294 Gene3D Chromosome segregation protein Spc25 123 223 - -
Gso6g1514 294 Coils Coil 37 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1514 Gso-Chr6 15341277 15346567 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1514 K11550 - gmx:100804876 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1514 6 15341277 15346567 Gso6g1514 6 15341277 15346567 ECH
Gso4g1567 4 45169158 45174975 Gso6g1514 6 15341277 15346567 GST
Gso5g0336 5 3505165 3508937 Gso6g1514 6 15341277 15346567 PCT
Gso17g0731 17 6721118 6728463 Gso6g1514 6 15341277 15346567 PCT
Gso6g1514 6 15341277 15346567 Gso5g0336 5 3505165 3508937 PCT
Gso6g1514 6 15341277 15346567 Gso17g0731 17 6721118 6728463 PCT