Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0336 ATGGAGTCCCCAATCTCAATCTGCGACACTGAGATCCCTCTTCTAATGCAGAGCATCGATGCTTTCACCGCTTCTTACGTCAAATCCCTCCATTCCCTCAGAGCCAGAGCGCAAGAAACCGCTCGATGTCAAGTTCAACTAGACGAGGTTAAATCTAAACTCAGAGAGACCGAGGATGATTTCGTCAAAGCACTTGCGGTCAAGACCCGCAAAGAGGCCAAGCGAATGGCTTTGATGGATGCTATTGCTTCTGCAAAGGCTAGAGTTGAAGACCTCAATGCATCTATTCAGGAGCAGCGAACCAAAAAGCAAGAATATGCTGCATTTATATCTCAACAATCTCTCGCTTTGGCAGCATCTGAAGGGAAGTTAAATGAAAGCATTGAACAGAATGATGAAACACAGGCCATTTCCTGGTACAATAGGGTCCTTGGTTTTCATGTAAAAGGCGGACGTGGGGTAAAATTCACATTCAAGAATATAAATATGAACAATCCAGATGAGGAGTACTTTTTTACTATCTTCCATGAAAATGATACATACTCATTGTTAAGCTGTGAACATTCCCTCAGGGACACCAAAGAGTTGATCCATGAATTAAACAAGACAAATGATCTATTTAAATTTGTCAGAATAATGAGGAAAAAGTTCCAAGAAGTTGTGGCACAAGGGAATTTAGTTGTGACAAAAGATGAACATGAAGAATCTGCCTTTAACTCTGCTTCTGCTCCAGTTTTATCAATGTCATCTGTTAGAAGTGATTTTCTAGGCAAGGAAAATGAGCATCAAGCTGAACCTATAGAAGGCAATAAACAGTTCAAAAAACAAAATGTTCATAGAAGGCTAAAATCATCAGTTTTATCTCCTGGATCTGCATCATCTGTTCGCCAGTCTCCTCGTTTGAAGGCTAGGAAATAA 918 0.4052 MESPISICDTEIPLLMQSIDAFTASYVKSLHSLRARAQETARCQVQLDEVKSKLRETEDDFVKALAVKTRKEAKRMALMDAIASAKARVEDLNASIQEQRTKKQEYAAFISQQSLALAASEGKLNESIEQNDETQAISWYNRVLGFHVKGGRGVKFTFKNINMNNPDEEYFFTIFHENDTYSLLSCEHSLRDTKELIHELNKTNDLFKFVRIMRKKFQEVVAQGNLVVTKDEHEESAFNSASAPVLSMSSVRSDFLGKENEHQAEPIEGNKQFKKQNVHRRLKSSVLSPGSASSVRQSPRLKARK* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0336 305 MobiDBLite consensus disorder prediction 257 305 - -
Gso5g0336 305 Pfam Chromosome segregation protein Spc25 150 218 IPR013255 GO:0007059|GO:0031262
Gso5g0336 305 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 8 303 IPR045143 GO:0007059|GO:0031262
Gso5g0336 305 PANTHER - 8 303 - -
Gso5g0336 305 Coils Coil 82 102 - -
Gso5g0336 305 MobiDBLite consensus disorder prediction 257 275 - -
Gso5g0336 305 Gene3D Chromosome segregation protein Spc25 126 225 - -
Gso5g0336 305 MobiDBLite consensus disorder prediction 282 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0336 Gso-Chr5 3505165 3508937 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0336 K11550 - gmx:100776032 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0336 5 3505165 3508937 Gso17g0731 17 6721118 6728463 GST
Gso5g0336 5 3505165 3508937 Gso4g1567 4 45169158 45174975 PCT
Gso5g0336 5 3505165 3508937 Gso6g1514 6 15341277 15346567 PCT
Gso4g1567 4 45169158 45174975 Gso5g0336 5 3505165 3508937 PCT
Gso6g1514 6 15341277 15346567 Gso5g0336 5 3505165 3508937 PCT