Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1567 ATGGCATCAATTTGCGACAACGATATCCCTCTTCGACTACACAACATCGACGCTTTCATCGCTTCTTACAGAAACTCCCTCCACTCGCTCAGAGCCACCGCACTCGAAGCCGCGCGATCTCAATCCGAATTAGCCGAGGTTAAAGCTAAACTGCGAGAGGCTGAGGATGAATTGGTAAAGGCACTTGCAGTTAAGACTCGGAGAGAGGCGAAGCGAATGGCCTTGAAAGAGGCGATTGTTTCTGTGAAGGGAAGAATTGAGGATCTGAAGACGAGTATTCAGAAGCAGAGAACCAAAAACGAGGAATGTGCCACGGTTGTGTCGCATCACCGTCTTGTTTTGGAAGTGTCTGAACAGAAATCAAATGAAAGCAGTGAACATAGAGATGAAGTCCAGGAGGCCATATCTTGGTACAATAGGATCCTTGGTTTTCAGATTGAAGGTGGACGTGGGGTAAAATTCAGCTTCAAGAATATTAATGTGGACAACCCAAATGAGGAGTTCTTTTTTACCATCCGCCACGAAGATGACGTGTATACATTGCTAAATTGTAAACCATCTGTCAAAGATACTGACGAGTTGATCCATGAATTAAACAACACAAATGGGCTATTTAAATTTGTCAGAACAATGAGGAAAAAGTTTCAAGAAGTAGTGGCACAAGGCCGTTTATCTATGACAACAAATGAACATCAAGAATCTGCCTTTATCTCTGCATCTGGTCCAGTTTTATCAATATCAACCATTACTGAAGATAATGATCATCAAGATGAACCCACCAAAGGTAATGCACATCTCCAGAAACAAGTTAATCGAAGAAGGGTAAAATCAGCAATTCTATCTCCTGGATCTGCATCATCTGTCCGTCAATCTCCTCGTTTGAAGGTCAGGAAATGA 897 0.4259 MASICDNDIPLRLHNIDAFIASYRNSLHSLRATALEAARSQSELAEVKAKLREAEDELVKALAVKTRREAKRMALKEAIVSVKGRIEDLKTSIQKQRTKNEECATVVSHHRLVLEVSEQKSNESSEHRDEVQEAISWYNRILGFQIEGGRGVKFSFKNINVDNPNEEFFFTIRHEDDVYTLLNCKPSVKDTDELIHELNNTNGLFKFVRTMRKKFQEVVAQGRLSMTTNEHQESAFISASGPVLSISTITEDNDHQDEPTKGNAHLQKQVNRRRVKSAILSPGSASSVRQSPRLKVRK* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1567 298 Gene3D Chromosome segregation protein Spc25 123 222 - -
Gso4g1567 298 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 5 272 IPR045143 GO:0007059|GO:0031262
Gso4g1567 298 Pfam Chromosome segregation protein Spc25 149 216 IPR013255 GO:0007059|GO:0031262
Gso4g1567 298 Coils Coil 37 64 - -
Gso4g1567 298 MobiDBLite consensus disorder prediction 252 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1567 Gso-Chr4 45169158 45174975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1567 K11550 - gmx:100804876 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1567 4 45169158 45174975 Gso6g1514 6 15341277 15346567 GST
Gso5g0336 5 3505165 3508937 Gso4g1567 4 45169158 45174975 PCT
Gso17g0731 17 6721118 6728463 Gso4g1567 4 45169158 45174975 PCT
Gso4g1567 4 45169158 45174975 Gso5g0336 5 3505165 3508937 PCT
Gso4g1567 4 45169158 45174975 Gso17g0731 17 6721118 6728463 PCT