LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso6g1505	ATGGCCTCAGTTTCGCAAAAGACGACGTCACCCTCCTCCTCTTCTTGTTCCGCCACCAACGCAGCCGCCGCCATTCCCCGCCTAGCTGCTGCCCCCTCCCCCGCCCCCGCCACCGCCGCCGCCGTGCCGCAAGACTGGACTGCTGCCGTCACCGACGTCCCCCGCATTTCTTCCACCAATGCATCTGCTGCCAAGGGAGTCGTTGCTGCAATGCCAAGGGCACAGTCAAGCCACCCTTTGGATCCTTTATCTGCTGCTGAAATCTCTGTGGCTGTGGCAACTGTGCGGGCTGCTGGATCTACTCCTGAGCTTAGAGATAGTATGCGCTTCATTGAAATAGTTTTACTGGAGCCAGATAAAAATGTTGTTGCACTGGCAGATGCATATTTCTTTCCACCTTTCCAACCATCATTACTTCCAAGAGCTAGAGGAGGACCTCTGATTCCAGCTAAACTCCCTCCAAGATGTGCCAGGCTTGTTGTTTACAGTAGGAAAACAAATGAGACTAGTATATGGATTGTTGAGTTGTCGCAAGTACATGCGGTAACTCGAGGTGGTCATCACCGAGGGAAAGTAATTTCATCACATGTTGTTCCTGATGTTCAGCCTCCAATGGATGCTGAGGAATATGCAGAATGCGAGGCTGTTGTCAAAAGTTTTCCCCCATTTATAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGACCTTGTAATGGTTGATCCGTGGTGTGTTGGTTATCACAGTGAAGCAGATGCTCCTGGGAAAAGACTTGCTAAACCACTCATATTTTGTCGATCCGAGAGTGACTGTCCTATGGAAAATGGCTATGCCCGACCTGTTGAGGGTATCTATGTTCTTGTTGATATGCAAAACATGGTGGTGTTAGAGTTTGAAGATCGTAAACTTGTTCCCCTCCCACCGGTTGATCCCTTGAGGAACTATACTCCTGGTGAAACCCGAGGTGGCTCTGATAGAAGTGATGTAAAACCCTTGCAAATTATTCAGCCTGAAGGTCCAAGCTTCCGTGTCAATGGGTATTTTGTTGAATGGCAGAAGTGGAATTTCCGTATTGGATTCACACCCAAAGAAGGTTTGGTTATATATTCTGTTGCATATGTTGATGGTAGTCATGGACGAAGGCCTGTTGCTCATAGGCTGAGTTTTGTGGAGATGGTTGTTCCCTATGGAGATCCAAATGATCCACATTACAGAAAAAATGCTTTTGATGCTGGGGAAGATGGATTGGGAAAAAATGCACATTCCCTCAAGAAGGGATGTGATTGTTTGGGATACATCAAGTATTTTGATGCTCACTTCACAAATTTCACTGGTGGGGTGGAAACAATTGAAAATTGTGTATGTTTGCATGAAGTGGATCATGGAATGCTCTGGAAACATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGATCTAGAAGACTTACAGTTTCTTTCATATGTACTGTTGCCAACTATGAGTATGGATTTTTTTGGCATTTTTATCAGGATGGAAGGATCGAAGCTGAAGTAAAGCTAACTGGAATTCTCAGCCTAGGAGCCTTACTGCCTGGAGAGTTTCGAAAATATGGAACCATGATTGCGCCTGGTCTATATGCACCAGTTCATCAGCACTTTTTTGTTGCTCGCATGGACATGTCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATATGAAAGTCGAGGAACCAGGTGAGAAGAATGTTCACAATAATGCATTCTATGCTGAAGAGACTTTGCTCAGATCTGAATTGGAAGCCATGCGTGATTGCAATTCTTTGACTGCTCGGCATTGGGTTGTAAGGAACACGAGAACATGCAATAGAACTGGACAGTTGACAGGCTATAAGCTGGTACCTGGCTCTAACTGCTTGCCATTGGCAGGCTCTGAAGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAACTTTTGGGTAACAACATATTCACGTGATGAGTTGTTTCCTGGAGGAGAATTTCCTAATCAAAATCCACGTGTTGGTGAAGGACTAGCTACATGGGTTAAGCAGAACCGATCTTTGGAAGAAACTAATGTAGTTCTTTGGTATATATTTGGAATCACACACGTTCCTCGTTTGGAAGACTGGCCTGTTATGCCAGTAGAGCGCATTGGTTTTATGCTCACGCCTCATGGATTCTTCAACTGTTCCCCTGCAGTAGATGTTCCGCCAAATGCATGTGAAATGGATTCTAAAGATAATGACATTAAGGATAATGGTTCTTCGAAACCAATTCAGAGTGGGTTAACGGCAAAGCTTTAG	2325	0.4516	MASVSQKTTSPSSSSCSATNAAAAIPRLAAAPSPAPATAAAVPQDWTAAVTDVPRISSTNASAAKGVVAAMPRAQSSHPLDPLSAAEISVAVATVRAAGSTPELRDSMRFIEIVLLEPDKNVVALADAYFFPPFQPSLLPRARGGPLIPAKLPPRCARLVVYSRKTNETSIWIVELSQVHAVTRGGHHRGKVISSHVVPDVQPPMDAEEYAECEAVVKSFPPFIEAMKKRGIEDMDLVMVDPWCVGYHSEADAPGKRLAKPLIFCRSESDCPMENGYARPVEGIYVLVDMQNMVVLEFEDRKLVPLPPVDPLRNYTPGETRGGSDRSDVKPLQIIQPEGPSFRVNGYFVEWQKWNFRIGFTPKEGLVIYSVAYVDGSHGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEVDHGMLWKHQDWRTGLAEVRRSRRLTVSFICTVANYEYGFFWHFYQDGRIEAEVKLTGILSLGALLPGEFRKYGTMIAPGLYAPVHQHFFVARMDMSVDSKPGEALNQVVEVNMKVEEPGEKNVHNNAFYAEETLLRSELEAMRDCNSLTARHWVVRNTRTCNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNFWVTTYSRDELFPGGEFPNQNPRVGEGLATWVKQNRSLEETNVVLWYIFGITHVPRLEDWPVMPVERIGFMLTPHGFFNCSPAVDVPPNACEMDSKDNDIKDNGSSKPIQSGLTAKL*	775

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso6g1505	774	PANTHER	AMINE OXIDASE	49	769	-	-
	Gso6g1505	774	Gene3D	Copper amine oxidase, catalytic domain	319	745	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Gso6g1505	774	Gene3D	-	207	310	-	-
	Gso6g1505	774	SUPERFAMILY	Amine oxidase catalytic domain	326	745	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Gso6g1505	774	SUPERFAMILY	Amine oxidase N-terminal region	202	320	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Gso6g1505	774	Pfam	Copper amine oxidase, enzyme domain	332	740	IPR015798	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Gso6g1505	774	MobiDBLite	consensus disorder prediction	309	328	-	-
	Gso6g1505	774	Pfam	Copper amine oxidase, N3 domain	203	306	IPR015802	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Gso6g1505	774	Gene3D	-	60	205	-	-
	Gso6g1505	774	SUPERFAMILY	Amine oxidase N-terminal region	76	204	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Gso6g1505	774	MobiDBLite	consensus disorder prediction	750	774	-	-
	Gso6g1505	774	Pfam	Copper amine oxidase, N2 domain	78	176	IPR015800	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Gso6g1505	774	PANTHER	COPPER AMINE OXIDASE	49	769	IPR000269	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso6g1505	Gso-Chr6	15176651	15182938	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso6g1505	K00276		-	gmx:100798722	1531.54

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso6g1505	6	15176651	15182938	Gso6g1505	6	15176651	15182938	ECH
	Gso5g0344	5	3622811	3625168	Gso6g1505	6	15176651	15182938	PCT
	Gso17g0722	17	6612875	6615405	Gso6g1505	6	15176651	15182938	PCT
	Gso6g1505	6	15176651	15182938	Gso5g0344	5	3622811	3625168	PCT
	Gso6g1505	6	15176651	15182938	Gso17g0722	17	6612875	6615405	PCT