Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0722 ATGATGGGTAAGCCTAACCCTAACCCTGCCCCGGAAGAAGAAAAGAGTCTCCGGGACGAGCTGCTGGGTCCCATCCTGCTCGGAGAGCGCGTGATAAAACTGGCTCAGGAGGCGGAGTCGCCGAAGGTGGACTGCACGGAGCTGGCGCGTAAGGTGCAGGTGGTCTGCGATAACCTCCGCTCCGTGGTGCGCGTGGTGTCTGGAACCCAGTGCGTCAACGAGCGCCCAATCCGCCGCATCGTCGGCGAGGTCTCGAAAAACATAGAGCGCACGTTAGCCCTCATCCGCAAGTGCAAGAAGCACGGTGGCGTCCTCCGCCAGGTCTTCTCCATGACCACCACCGCCGACTTCCGCAAAGTCCGGAGCCTTCTCGAATCTTCCAACGGCGACCTGGTGTGGCTCCTCACCATCTTGGACTCCAAAGACGGCACCAATGTCTCACTCCCCCCTATCGCCAGCAACGACCCTATTCTCGCTTGGGTCTGGACCTTCACCTACACTCTCCAATTGGGCCAGCCCAAGGACCGCGCAGAAGCCGCCACTGAACTCGGTTCTCTCGCCAGAGACAACGACCGTACAAAATTTATCATATTGGATGAAGGTGGGGTGATGCCCCTCCTCAAGCTTCTTAAAGAAGCTTCTTCCCCTGCTGCTCAGGTCGCTGCTGCCAATGCTCTTGTTAACATCACAACCAATCAAGACAGGGTTGTTACTTTCATTGTGGAGTCCCATGCTGTCCCCATCATTGTTCAGGTTCTCGGTGATTCCCCTATGAGGGTTCGTGTCTCTGTTGCCAATTTGGTCTCTGCTATGGCCGAGCAACATGAACTTGCTCGCGAGGAGTTCGTCAGGGCCAATGTCGCTAGGCCCCTTGTGTCCTTGTTGTCCATGGATATGGGTACTGTCCTCACTGACCCCGTGGCCGACCGCGCCACCAGCATTCACTCGCTTGTTCTCAATTTATCCAATGTTGGGGAGGCGAATTCAGATGGGAGTAGCCGCGGCTCCGGCCAGCATCGAAGAGATAGAGAGGTCGAGAGCCCCGAGTTGAGGAATGAGGTCAAAGTCAGTTGTGCTAAGGCTCTTTGGAAACTCTCCAATGGATGTCTCTCAAGTTGCAGGAAGATTACCGAGACTAAAGGTTTGCTTTGTCTTGCCAAGATTATTGAGTCCGAGAGTGGGGAGTTGCAGCTTAATTGTCTTATGGCTGTCATGGAGATTGCTGCCGTGGCGGAGTCCAATGCTGATCTTAGAAGAGCTGCTTTTAAGCGAACTGCGCCGGCGGCAAAGGCGGTTTTGGATCAGCTTTTGCGGGTGGTTCAGGAGGAGAGCGACCCGGCATTGCGGATTCCTGCTATTAAGGCAATTGGTTCCTTGGCCAGAAACTTCTCTGGGAAGGTTCCGCAGGTTATTGGTCCTTTAGTTGCTCAGCTTGGTAACAGAGATGTTGATGTGGCCAGTGAGGCTGCTATTGCTTTGGGGAAGTTTGTGTGCCCGGACAACTACAACTGTGTTGACCATTCTAAGGCAATACTTGAGCTTGATGGGATTCCTAAGCTAATGAGCCTGCTGCAGATAAATGATCGCCAACAAGTTCATGGCCTGAAATTACTTTGTTACCTTGCCTTAAATGTTGGTAACAGTAGGGTCCTTGAGCAAGAACGTGCCTTGAATACCCTAGAGAGATTTGCTCGTCCTGTTCAAGCACAACATCCTGATTTGAAGGACCTTTTTGCAAAGGCCTTACACCACCTCACTCTTTATCAGCCAGGAGCTCAATTGCACAGACAGCCCTTGGGGCTGTAA 1806 0.5321 MMGKPNPNPAPEEEKSLRDELLGPILLGERVIKLAQEAESPKVDCTELARKVQVVCDNLRSVVRVVSGTQCVNERPIRRIVGEVSKNIERTLALIRKCKKHGGVLRQVFSMTTTADFRKVRSLLESSNGDLVWLLTILDSKDGTNVSLPPIASNDPILAWVWTFTYTLQLGQPKDRAEAATELGSLARDNDRTKFIILDEGGVMPLLKLLKEASSPAAQVAAANALVNITTNQDRVVTFIVESHAVPIIVQVLGDSPMRVRVSVANLVSAMAEQHELAREEFVRANVARPLVSLLSMDMGTVLTDPVADRATSIHSLVLNLSNVGEANSDGSSRGSGQHRRDREVESPELRNEVKVSCAKALWKLSNGCLSSCRKITETKGLLCLAKIIESESGELQLNCLMAVMEIAAVAESNADLRRAAFKRTAPAAKAVLDQLLRVVQEESDPALRIPAIKAIGSLARNFSGKVPQVIGPLVAQLGNRDVDVASEAAIALGKFVCPDNYNCVDHSKAILELDGIPKLMSLLQINDRQQVHGLKLLCYLALNVGNSRVLEQERALNTLERFARPVQAQHPDLKDLFAKALHHLTLYQPGAQLHRQPLGL* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0722 601 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 12 599 - -
Gso17g0722 601 Gene3D - 336 597 IPR011989 -
Gso17g0722 601 Gene3D - 164 330 IPR011989 -
Gso17g0722 601 MobiDBLite consensus disorder prediction 327 348 - -
Gso17g0722 601 SMART arm_5 504 543 IPR000225 GO:0005515
Gso17g0722 601 SMART arm_5 232 273 IPR000225 GO:0005515
Gso17g0722 601 SMART arm_5 189 231 IPR000225 GO:0005515
Gso17g0722 601 SUPERFAMILY ARM repeat 172 586 IPR016024 -
Gso17g0722 601 Gene3D - 20 137 IPR036537 GO:0007166
Gso17g0722 601 PANTHER ARMADILLO REPEAT ONLY 4 12 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0722 Gso-Chr17 6612875 6615405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0722 - - gmx:100817625 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0344 5 3622811 3625168 Gso17g0722 17 6612875 6615405 GST
Gso17g0722 17 6612875 6615405 Gso6g1505 6 15176651 15182938 PCT
Gso6g1505 6 15176651 15182938 Gso17g0722 17 6612875 6615405 PCT