Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0344 ATGATGGGTAACCCAAACCCTAACCCTACCCCTACCCCGGAAGAGGAAAAGAGCCTCAAGGAGGAGCTGCTGGATCCCATCCTGCTCGGAGAGCGTGTGATAAAGCTTGCTCAGGAGGCGGAGTCGTCTAAGGTGGACTGCACGGAGCTGGCGCGTAAGGTGCAGGTGGTCTGTGACAACCTCCGCTCCGTGGTGCGCGTTGTGTCGGGGGCTCAGTGCCTCAACGAGCGCCCCATCCGCCGCATCGTCGGCGAGGTCTTCAAAAACCTAGAGCGCACGTTAGCGTTCATCCGCAAGTGCAAGAAGCACGGCGGCGTCCTCCGCCAGGTCTTCTCCATGACCACCACCGCCGATTTCCGCAAAGTCTGGAGCCTTCTCGAATCTTCCAACGGCGACCTGGTCTGGCTCCTCACCATCTTGGACTCCAAAGACGGCACCAATGTCTCACTTCCCCCTATTGCCAGCAACGACCCTATTCTCGCTTGGGTCTGGACCTTCACCTACACTCTCCAATTGGGCCAGCCCAAGGACCGCGCCGAAGCCGCTACCGAACTCGGTTCACTCGCCAGAGACAACGACCGTACAAAATTTATCATCTTGGAGGAAGGTGGGGTGATGCCCCTCCTTAAGCTTCTCAAGGAAGCTTCTTTCCCCGATGCTCAGATCGCAGCTGCCAATGCTCTTGTTAACATTACAACCAATCAAGACAGGATTGTTGGTTTCATTGTGGAGTCCCATGCTGTCCCCACCATTGTTCAGGTTCTCGGTGATTCCCCTATGAGGGTTCGTGTCTCTGTTGCCAATTTGGTCTCTACTATGGCTGAGCAACATGAGCTTGTTCGCGAGGAGTTCATCAGGGCCAATGTGACTAGGCCCCTTGTGTCCTTGTTGTCCATGGATATGGGTACTGTCCTTGCTGACCCCATGGCCGGTCGCGCCAGCATTCATTCGCTTGTTCTCAATTTGTCCAATGTCGGGGAGGCGAATTCGGATGGGAGTAGCCGCGGCTCCAGCCACCAGCGAAGAGATAGAGAGGTTGAAAGCCCGGAGTTGAGGAATGAGGTCAAAATCAGTTGTGCTAAGGCTCTTTGGAAACTCTCCAAAGGGTGTCTTTCAAGTTGCAGGAAGATTACCGAGACTAAAGGTTTGCTTTGTCTTGCTAAGATTATTGAGTCCGAGAGTGGGGAATTGCAGCTCAATTGTCTTATGGCTGTCATGGAGATTGCTGCTGTGGCAGAGTCGAATGCTGATCTTAGAAGAGCTGCTTTTAAGCGAACTGCACCGGCAGCCAAGGCAGTTTTGGATCAACTTTTGAGGGTGGTTCAGGAGGAGAGTGATCCGGCATTGCGGATTCCTGCTATAAAGGCAATTGGTTCCTTGGCCAGAAACTTCTCTGGGAAGGTTCCACAGGTTATTGGTCCTTTAGTTGCTCAGCTTGGTAACAGAGATGTTGATGTGGCTAGTGAGGCTGCCATTGCTTTGGGGAAGTTTGTGTGCCCAGACAACTACAACTGCATTGACCATTCTAAGGCAATACTTGAGCTTGATGGGATCCCTAAGCTAATGAGCCTGCTGCAGATAAATGATCGCCAACAAGTTCATGGCCTTAAATTACTTTGTTACCTTGCCTTAAATGTAGGTAACAGTAAGGTCCTTGAGCAAGAACGTGCTTTGAATACCCTAGAGAGGTTTGCTCGTCCTGTTCAAGCACAACATCCTGATATGAAGGACCTTTTTGCAAAGGCCATACACCACCTCACTCTTTATCAGCCTGGAGCTCAATTGCACAGACAGCCCTTGGGGCTGTAA 1809 0.5196 MMGNPNPNPTPTPEEEKSLKEELLDPILLGERVIKLAQEAESSKVDCTELARKVQVVCDNLRSVVRVVSGAQCLNERPIRRIVGEVFKNLERTLAFIRKCKKHGGVLRQVFSMTTTADFRKVWSLLESSNGDLVWLLTILDSKDGTNVSLPPIASNDPILAWVWTFTYTLQLGQPKDRAEAATELGSLARDNDRTKFIILEEGGVMPLLKLLKEASFPDAQIAAANALVNITTNQDRIVGFIVESHAVPTIVQVLGDSPMRVRVSVANLVSTMAEQHELVREEFIRANVTRPLVSLLSMDMGTVLADPMAGRASIHSLVLNLSNVGEANSDGSSRGSSHQRRDREVESPELRNEVKISCAKALWKLSKGCLSSCRKITETKGLLCLAKIIESESGELQLNCLMAVMEIAAVAESNADLRRAAFKRTAPAAKAVLDQLLRVVQEESDPALRIPAIKAIGSLARNFSGKVPQVIGPLVAQLGNRDVDVASEAAIALGKFVCPDNYNCIDHSKAILELDGIPKLMSLLQINDRQQVHGLKLLCYLALNVGNSKVLEQERALNTLERFARPVQAQHPDMKDLFAKAIHHLTLYQPGAQLHRQPLGL* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0344 602 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 203 236 IPR000225 GO:0005515
Gso5g0344 602 Gene3D - 22 139 IPR036537 GO:0007166
Gso5g0344 602 Gene3D - 169 327 IPR011989 -
Gso5g0344 602 SUPERFAMILY ARM repeat 174 583 IPR016024 -
Gso5g0344 602 PANTHER ARMADILLO REPEAT ONLY 4 14 600 - -
Gso5g0344 602 MobiDBLite consensus disorder prediction 328 349 - -
Gso5g0344 602 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 14 600 - -
Gso5g0344 602 Gene3D - 335 597 IPR011989 -
Gso5g0344 602 SMART arm_5 234 275 IPR000225 GO:0005515
Gso5g0344 602 SMART arm_5 191 233 IPR000225 GO:0005515
Gso5g0344 602 SMART arm_5 505 544 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0344 Gso-Chr5 3622811 3625168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0344 - - gmx:100813824 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0344 5 3622811 3625168 Gso17g0722 17 6612875 6615405 GST
Gso5g0344 5 3622811 3625168 Gso6g1505 6 15176651 15182938 PCT
Gso6g1505 6 15176651 15182938 Gso5g0344 5 3622811 3625168 PCT