Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1441 ATGTGTAAAGAGAAAAAAAGGATCATAATTAACTTGTTAGCATTGGCGTTACAGAGAGAGAGAGAGAGAGTTATTATGGTGACTATGGAAGAGAGTCCAAGGAGCCCAGAGGCGAAGCTGGGGTTGCGAGTGGAGGATCTATGGGACATTCAGGAACCACAGCTAAGTCCTGATGAGAAGTTCAATGCTTGCTTTGAAAGCATACCTGTCTCTGCCTTCCCTCCACCTCCTTCAAATCAAGAAATTGAGATAAAATCAGATGCCACCCTAGCCGAGGCAGTAAAAATACTTGCAGAACACAACATTCTTAGTGCACCTGTGGTGGACGTAGATGCACCCAATGATGCCAGTTGGATTGACAGATATATAGGAATAGTTGAGTTTGCTGGAATTGTTGTTTGGATTCTGCATCAGTCTGAACCCACATCTCCAAGGAGTCCATCCGGTGGAGCTGCTAATACGGCTGCAGTGAATGGAATAACTTCTGAAGCATTAGGCCTTGAATCTGCTTCGACAACTTCAGGCAATTTCTTTGAGGATCTGACTTCTTCTCAACTATATAAGAACACCAAGGTTCGTGACATTTCAGGGTCATTCCGCTGGGCTCCATTTCTCGCTCTGGAGAGATCAAACTCATTTTTGACCATGCTTTTGCTGCTTTCCAAGTACAAGATGAAGAGTATTCCTGTGGTGGACTTGGGTGCAGGTCGAATTGACAACATTATTACACAGTCTTCTGTAATTCACATGTTGGCAGAATGTGCTGGTCTTCAGTGGTTTGAGAGTTGGGGAACCAAGAAACTGTCTGAAGTTGGTCTTCCCATGGTGACACCAAATCATATTATCAAGGTTTACGAGGATGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAAAAGAGGATTGGAGGGTTGCCAGTGATGGACAGGGGTAGCAGCACGGCAATTGGTAACATAAGCCTGAAAGATGTTCAATTCCTCCTAACTGCTCCTGAAATCTACCATGATTATAGATCTATTACAGCAAAAGACTTCCTGACAGCCATTAGAAGCTACTTAGAGAAGCATGAAGGGGCCTTTCCAATGTCAGGTGACCTGATTACATGCAATAAGGATTGCACAATCAAAGAATTGATTCAACTGCTTGACCATGAGAAGATTCATAGGGTCTACGTTGCTGACAATGACGGGAATCTGGAAGGACTAATCACACTCAGAGATATCATCTCAAGGCTAGTACACGAGCCTCGTGGCTATTTTGGTGATTTCTTTGATGGGGTTCTCCCAATGCCTCCAAACAGCAGGGTTTGA 1311 0.4394 MCKEKKRIIINLLALALQRERERVIMVTMEESPRSPEAKLGLRVEDLWDIQEPQLSPDEKFNACFESIPVSAFPPPPSNQEIEIKSDATLAEAVKILAEHNILSAPVVDVDAPNDASWIDRYIGIVEFAGIVVWILHQSEPTSPRSPSGGAANTAAVNGITSEALGLESASTTSGNFFEDLTSSQLYKNTKVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSIPVVDLGAGRIDNIITQSSVIHMLAECAGLQWFESWGTKKLSEVGLPMVTPNHIIKVYEDEPVLQAFKLMRKKRIGGLPVMDRGSSTAIGNISLKDVQFLLTAPEIYHDYRSITAKDFLTAIRSYLEKHEGAFPMSGDLITCNKDCTIKELIQLLDHEKIHRVYVADNDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1441 436 CDD CBS_pair_SF 84 248 - -
Gso6g1441 436 CDD CBS_pair_SF 280 409 - -
Gso6g1441 436 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 27 436 - -
Gso6g1441 436 ProSiteProfiles CBS domain profile. 275 337 IPR000644 -
Gso6g1441 436 SMART cbs_1 280 329 IPR000644 -
Gso6g1441 436 SMART cbs_1 203 252 IPR000644 -
Gso6g1441 436 SMART cbs_1 365 413 IPR000644 -
Gso6g1441 436 SMART cbs_1 80 136 IPR000644 -
Gso6g1441 436 Pfam CBS domain 362 413 IPR000644 -
Gso6g1441 436 Pfam CBS domain 82 127 IPR000644 -
Gso6g1441 436 Pfam CBS domain 281 324 IPR000644 -
Gso6g1441 436 PANTHER BNAA06G16460D PROTEIN 27 436 - -
Gso6g1441 436 Gene3D - 71 258 IPR046342 -
Gso6g1441 436 ProSiteProfiles CBS domain profile. 77 142 IPR000644 -
Gso6g1441 436 SUPERFAMILY CBS-domain pair 57 252 IPR046342 -
Gso6g1441 436 Gene3D - 265 415 IPR046342 -
Gso6g1441 436 SUPERFAMILY CBS-domain pair 275 422 IPR046342 -
Gso6g1441 436 ProSiteProfiles CBS domain profile. 362 420 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1441 Gso-Chr6 14355516 14359241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1441 - - gmx:100776754 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1441 6 14355516 14359241 Gso6g1441 6 14355516 14359241 ECH
Gso4g1649 4 46310706 46314158 Gso6g1441 6 14355516 14359241 GST
Gso5g0397 5 4197922 4201557 Gso6g1441 6 14355516 14359241 PCT
Gso17g1094 17 10405593 10409282 Gso6g1441 6 14355516 14359241 PCT
Gso6g1441 6 14355516 14359241 Gso5g0397 5 4197922 4201557 PCT
Gso6g1441 6 14355516 14359241 Gso17g1094 17 10405593 10409282 PCT