Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1649 ATGGTGACTATGGAAGAGAGTCCAAGGAGCCCAGAGGCGAAGCTGGGGTTGCGAGTGGAGGATTTATGGGACATTCAAGAACCACAGCTAAGTCCTGATGAGAAGCTCAATGCTTGCTTTGAAAGCATCCCTGTCTCTGCCTTCCCTCCACCTCCTTCAAATCAAGAAGTTGAGATAAAATCAGATGCCACCCTAGCCGAGGCAGTAAAACTACTTGCAGAACACAGCATTCTCAGTGCACCTGTGGTGGATGTAGATGCACCCGAAGATGCTAGTTGGATTGACAGATATATAGGAATAGTTGAGTTTGCTGGAATTGTTGTTTGGATTCTGCATCAGTCTGAACCCACATCTCCTAGGAGTCCATCCAGTGGAGCTGCTAATACGGCTGCAGTTACTGGAGTAGCTTATGAAGCATTAGGCCTTGAATCTGCTGCGACAACTTCAGGCAATTTTTTCGAGGATCTGACTTCTTCTCAACTATATAAGAATACCAAGGTTCGTGACATTTCAGGGTCATTCCGTTGGGCCCCATTTCTCGCTTTGGAGAGATCAAACTCATTTTTGACCATGCTTTTGCTGCTTTCCAAGTACAAGATGAAGAGTATTCCTGTGGTGGACTTGGGTGCTGGTCGAATTGACAACATTATTACACAGTCTTCTGTAATTCACATGTTGGCAGAATGTGCTGGTCTTCAGTGGTTTGAGAGTTGGGGAACCAAGAAACTTTCTGAAGTTGGTCTTCCCATGGTGACACCAAATCATATTATCAAGGTTTATGAGGATGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAAAAGAGGATTGGAGGGTTGCCAGTGATGGAAAGGGGTGGCAGCAGGGCAATTGGTAACATAAGCCTGCAAGATGTTCAATTCCTCCTAACTGCTCCTGAAATCTACCATGATTATAGATCTATTACAGCAAAAGACTTCCTGACAGCCGTTAGAAGCTACTTAGAGAAGCATGAAGGGGCCTTTCCAATGTCAGGTGACCTGATTACATGCAATAAGAATTGCACAATCAAAGAATTGATTCAACTGCTTGACCATGAGAAGAATCATAGGGTCTACGTTGCTGACAATGAAGGGAATCTAGAAGGACTAATCACACTAAGAGATATCATATCAAGGCTAGTACATGAACCCCGTGGCTATTTTGGCGATTTCTTTGATGGGGTTCTCCCGATGCCTCCAAACAGCAGGGTTTGA 1236 0.4442 MVTMEESPRSPEAKLGLRVEDLWDIQEPQLSPDEKLNACFESIPVSAFPPPPSNQEVEIKSDATLAEAVKLLAEHSILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPTSPRSPSSGAANTAAVTGVAYEALGLESAATTSGNFFEDLTSSQLYKNTKVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSIPVVDLGAGRIDNIITQSSVIHMLAECAGLQWFESWGTKKLSEVGLPMVTPNHIIKVYEDEPVLQAFKLMRKKRIGGLPVMERGGSRAIGNISLQDVQFLLTAPEIYHDYRSITAKDFLTAVRSYLEKHEGAFPMSGDLITCNKNCTIKELIQLLDHEKNHRVYVADNEGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1649 411 ProSiteProfiles CBS domain profile. 337 395 IPR000644 -
Gso4g1649 411 Gene3D - 37 232 IPR046342 -
Gso4g1649 411 SUPERFAMILY CBS-domain pair 29 227 IPR046342 -
Gso4g1649 411 Pfam CBS domain 337 388 IPR000644 -
Gso4g1649 411 Pfam CBS domain 256 299 IPR000644 -
Gso4g1649 411 CDD CBS_pair_SF 59 223 - -
Gso4g1649 411 PANTHER BNAA06G16460D PROTEIN 7 411 - -
Gso4g1649 411 ProSiteProfiles CBS domain profile. 250 312 IPR000644 -
Gso4g1649 411 Gene3D - 240 390 IPR046342 -
Gso4g1649 411 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 7 411 - -
Gso4g1649 411 SUPERFAMILY CBS-domain pair 250 397 IPR046342 -
Gso4g1649 411 ProSiteProfiles CBS domain profile. 52 117 IPR000644 -
Gso4g1649 411 SMART cbs_1 55 111 IPR000644 -
Gso4g1649 411 SMART cbs_1 255 304 IPR000644 -
Gso4g1649 411 SMART cbs_1 340 388 IPR000644 -
Gso4g1649 411 SMART cbs_1 178 227 IPR000644 -
Gso4g1649 411 CDD CBS_pair_SF 255 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1649 Gso-Chr4 46310706 46314158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1649 - - gmx:100780629 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1649 4 46310706 46314158 Gso6g1441 6 14355516 14359241 GST
Gso5g0397 5 4197922 4201557 Gso4g1649 4 46310706 46314158 PCT
Gso17g1094 17 10405593 10409282 Gso4g1649 4 46310706 46314158 PCT
Gso4g1649 4 46310706 46314158 Gso5g0397 5 4197922 4201557 PCT
Gso4g1649 4 46310706 46314158 Gso17g1094 17 10405593 10409282 PCT