Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1017 ATGAATCAGTGGATACAGGACATCGATTTGAGAGCTTGTGGAAAACGAAGAAGCTCGTTGATTGGAGAAGTTGGTTTAATGGCTAAAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAATAGAATGAACCCTCCAAGGGTCTCTGTGGACAATGCTAGTTGCCATGATTGTACACTGATTAAGATTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATCTTGACAGACCTTGACTTCGTAATTACCAAAGCTTACATATCTTCTGATGGGGGTTGGTTTATGGATGTATTTCATGTCACGGACCAGCAAGGAAAAAAGATAACAGATAGCAAAACCATCGACCTCATTGAAAAGGCTCTAGGACCAAAGAGCAAGAGCACAGAAGGGGTGAAAAATTGGCCGAGCAAACACGTTGGAGTGCATTCTGTTGGTGATTATACAGCCATTGAGCTAATTGGCAGAGACCGCCCAGGTCTCTTGTCTGAGATTTCGGCTGTTCTTGCCAACCTCCATTTTAATGTTTTTGCAGCAGAAGTTTGGACTCATAACAGGCGAATTGCTTGCGTTCTTTATGTCAATGATGCAACAAACCAAGTTGCGGATGATCCAAAAAGATTATCTCTTATGGAGGAGCAGCTCAACAACATCTTACGTGGATGTGATGGTGAGAAAGTAGCCAGGACCAGTTTCTCCATGGGTTCCACCCATATGGATCGGCGGCTTCACCAAATGTTGTTCGCTGATCGGGATTATGAAAGTTATGCAGTAGCAAGAGAAGTTGATAGTCCTCCCTCTTTAAGGCCAAGAATCACAATAGAACGTTGTGAGGAAAAAGGGTACTCAGTGGTCAGTGTCAAGTGCAAAGATAGGGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAGTATCATCAGATGGCCCTTATGCATTGCAGGAGTATTTTATTCGACATATGGATGGATGCACGCTTGATACACAAGGAGAAAAAGAAAGGGTCATCCAATGCATTGAAGCTGCTATTCGAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTGTGTGCAAAGGATAGAGTGGGGTTGCTGTCAGAAGTAACAAGGATTCTACGAGAGAATGGGTTGTCAGTGTGTAGGGCAGGTGTATCAACAAGAGGGGAGCAAGCACTGAATGTGTTCTACGTGAGGGATGCATCAGGGAACCCTGTGGACATGAAAACTATGGAAGCACTTTGTAAAGAAATAGGTAAAACAATGATGGTGGATGTCAAGAGAGTGCCAAGCAATACCAAAGCACCTGAGACTCGAGGATGGGCTAAAACTAGTTTCTTCTTTGGTAACTTGTTGGAAAGGTTCTTGACCTAA 1416 0.4322 MNQWIQDIDLRACGKRRSSLIGEVGLMAKVCWPYFDPEYENFSNRMNPPRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLDFVITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSKSTEGVKNWPSKHVGVHSVGDYTAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDATNQVADDPKRLSLMEEQLNNILRGCDGEKVARTSFSMGSTHMDRRLHQMLFADRDYESYAVAREVDSPPSLRPRITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLSVCRAGVSTRGEQALNVFYVRDASGNPVDMKTMEALCKEIGKTMMVDVKRVPSNTKAPETRGWAKTSFFFGNLLERFLT* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1017 471 SUPERFAMILY ACT-like 151 226 IPR045865 -
Gso6g1017 471 ProSiteProfiles ACT domain profile. 368 445 IPR002912 -
Gso6g1017 471 CDD ACT_ACR_1 61 131 - -
Gso6g1017 471 CDD ACT_ACR_4 366 437 - -
Gso6g1017 471 SUPERFAMILY ACT-like 364 438 IPR045865 -
Gso6g1017 471 ProSiteProfiles ACT domain profile. 63 140 IPR002912 -
Gso6g1017 471 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 30 471 IPR040217 -
Gso6g1017 471 Gene3D - 154 228 - -
Gso6g1017 471 CDD ACT_ACR_3 288 362 - -
Gso6g1017 471 ProSiteProfiles ACT domain profile. 156 235 IPR002912 -
Gso6g1017 471 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 30 471 - -
Gso6g1017 471 Pfam ACT domain 368 429 IPR002912 -
Gso6g1017 471 Pfam ACT domain 156 225 IPR002912 -
Gso6g1017 471 Pfam ACT domain 63 111 IPR002912 -
Gso6g1017 471 Gene3D - 363 444 - -
Gso6g1017 471 SUPERFAMILY ACT-like 58 132 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1017 Gso-Chr6 9890574 9898663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1017 - - gsj:114415474 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2032 4 50701894 50710161 Gso6g1017 6 9890574 9898663 GST
Gso13g0205 13 11380083 11391833 Gso6g1017 6 9890574 9898663 PCT
Gso6g1017 6 9890574 9898663 Gso13g0205 13 11380083 11391833 PCT