Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0205 ATGACAAAAGTTTGTTGGCCATATTTTGATCCGGAGTATGAGAACTTCAGCAACAGAATCAACCCTCCAAGGGTCTCTGTGGACAACGATAGTTGCCATGATTGTACACTGATCAAGTTTGATAGTATTAACAAACCTGGAATTCTGCTGGAAGTGGTGCAAATCCTGACAGACCTTGACTTCATAATTACCAAAGCTTACATATCGTCTGATGGTGGATGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAAGAAGATAACAGACAGCAAAACGATTGACTTCATTGAAAAGACTCTAGGACCAAAAGGCCAGAGCACAGAAGGGGTGAAGAGTTGGAAAGGCAAAAGGGTTGGAGTGCACTCAATTGGTGATCACACAGTAATTGAGCTCATCGGTAGAGACCGCCCTGGTCTTTTGTCTGAGATATCAGCAGTCCTTGCCAGCCTCCAATTCAATGTCATTGCAGCTGAAGTTTGGACTCATAACAGGAGAATAGCTTGTGTCCTTTATGTCAATGATGCTACAAACCAAGCCATGGATGACTCAAAAAGACTGTCTATTATAGAGGAGCAACTCAACCACATCCTACGCGGGTGTGAGGATGATGAGAAAGTGGCTAGGACCAGTTTCTCAATGGGTATCACCCACATGGATCGGAGGCTCCACCAAATGCTGTTTGCTGATAGGGACTATGAAAGTGCTGGAGTAACAACAACAGATGTTGATTGTCCCCCTTGTTTTAGGCCAAATATTAGAATAGAACGTATTGTGGAAAAAGGTTACTCAGTGGTTAGTGTGAAATGCAAAGATCGGGCAAAATTGATGTTTGACATTGTTTGCACTCTCACTGACATGGAATATGTTGTTTTCCATGCTACAATCTCTTCCGAAGGGCAATATGCATCCCAGGAGTACTTTATCCGGCACATGGACGGATGCACACTTGATACTGAAGGAGAGAAAGAAAGGGCCATCAAATGCATTGAAGCTGCCATACAAAGAAGAGTTAGCGAGGGTGTGAGTCTTGAGCTTTGTGCAAAGGACAGAGTGGGGTTGCTATCTGAAGTGACAAGGATTCTAAGAGAGAATGGCTTAACAGTTAGTAGGGCAGGTGTGTCAACTGTAGGGGAGAAAGGCCTCAATGTGTTCTATGTGAGAGATGCATCTGGGAACCCAGTGGACATGAAGATCATCGAAGCACTACACAAGGAAATTGGACAGACAGTGATGGTCAATGTGAAGAGGATACCAGCTGCCTATGCCAAAGCACCAGTTGAAACCCGAGGTTGGGCTAGAACAAGCTTCTTCTTTGGGAACTTGTTGGAAAGATTCTTGACTTGA 1350 0.4407 MTKVCWPYFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVKSWKGKRVGVHSIGDHTVIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDATNQAMDDSKRLSIIEEQLNHILRGCEDDEKVARTSFSMGITHMDRRLHQMLFADRDYESAGVTTTDVDCPPCFRPNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFIRHMDGCTLDTEGEKERAIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVSRAGVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQTVMVNVKRIPAAYAKAPVETRGWARTSFFFGNLLERFLT* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0205 449 SUPERFAMILY ACT-like 125 201 IPR045865 -
Gso13g0205 449 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 449 IPR040217 -
Gso13g0205 449 CDD ACT_ACR_4 342 413 - -
Gso13g0205 449 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 449 - -
Gso13g0205 449 ProSiteProfiles ACT domain profile. 344 421 IPR002912 -
Gso13g0205 449 CDD ACT_ACR_3 264 338 - -
Gso13g0205 449 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Gso13g0205 449 Pfam ACT domain 129 167 IPR002912 -
Gso13g0205 449 Pfam ACT domain 37 85 IPR002912 -
Gso13g0205 449 Pfam ACT domain 344 404 IPR002912 -
Gso13g0205 449 Gene3D - 124 200 - -
Gso13g0205 449 Gene3D - 339 419 - -
Gso13g0205 449 CDD ACT_ACR_1 35 106 - -
Gso13g0205 449 SUPERFAMILY ACT-like 32 105 IPR045865 -
Gso13g0205 449 SUPERFAMILY ACT-like 340 410 IPR045865 -
Gso13g0205 449 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0205 Gso-Chr13 11380083 11391833 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0205 - - gmx:121172621 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0205 13 11380083 11391833 Gso4g2032 4 50701894 50710161 PCT
Gso13g0205 13 11380083 11391833 Gso6g1017 6 9890574 9898663 PCT
Gso4g2032 4 50701894 50710161 Gso13g0205 13 11380083 11391833 PCT
Gso6g1017 6 9890574 9898663 Gso13g0205 13 11380083 11391833 PCT