Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2032 ATGGCTAAAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAATAGAATGAACCCTCCAAGGGTCTCTATGGACAATGCTAGTTGCCATGATTGTACACTGATCAAGGTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATCTTGACAGACCTTGACTTCATAATTACCAAAGCTTACATATCTTCTGATGGGGGTTGGTTTATGGATGTATTTCATGTAACGGATCAGCAAGGAAAAAAGATAACAGATAGCAAAACCATCGACTTCATTGAAAAGGCTCTAGGACCAAAGAGCCAGAGCACAGAAGGGGTGAAAAATTGGCCAAGCAAACGCGTTGGAGTGCATTCTGTTGGTGATCATACAGCCATTGAGCTAATTGGCAGAGACCGCCCAGGTCTCTTGTCTGAGATTTCAGCTGTTCTTGCCAACCTCCATTTTAATGTTTTTGCAGCAGAAGTTTGGACTCATAACAGGCGAATCGCTTGTGTTCTTTATGTCAATGATGCTACAAACCAAGCTGTAGATGAAGCAAACAGATTATCTCTTATGGAGGAGCAGCTCAACAACATCTTACGTGGATGTGATGGTGAGAAAGTTGCTAGGACCAGTTTCTCCATGGGTTCCACCCATATGGATCGGCGGCTTCACCAAATGTTGTTCGCTGATCGGGATTATGAAAGTTATGCAGTAGCAAGAGAGGTTGATAGTCCTCCCTCTTTAAGGCCAAAAATCACAATAGAACGTTGTGAGGAAAAAGGGTACTCAGTGGTCAGTGTGAAGTGCAAAGATAGGGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAGTCTCATCAGATGGCCCTTATGCATTGCAGGAGTATTTTATTCGACATATGGATGGATGCACGCTTGATACACAAGGAGAGAAAGAAAGGGTCATCCAATGTATTGAAGCTGCTATTCGAAGAAGAGTAAGCGAGGGAGTGAGCCTTGAGCTGTGTGCGAAGGATAGAGTGGGGTTGCTGTCAGAAGTAACAAGGATTCTACGAGAGAATGGGTTGACAGTGTGTAGGGCAGGTGTATCAACAAGAGGGGAGCAAGCACTGAATGTGTTCTACGTGAGGGATGCATCAGGGAACCCTGTGGACATGAAAACTATGGAAGCACTTCGTAAAGAAATAGGTAAGACAATGATGGTGGATGTGAAGAGAGTGCCAAGCAATGCCAAAGCACCAGAGACCCGAGGATGGGCTAAAACTAGTTTCTTCTTTGGTAACTTGTTGGAAAGGTTCTTGACCTGA 1338 0.4365 MAKVCWPYFDPEYENFSNRMNPPRVSMDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSTEGVKNWPSKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDATNQAVDEANRLSLMEEQLNNILRGCDGEKVARTSFSMGSTHMDRRLHQMLFADRDYESYAVAREVDSPPSLRPKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVPSNAKAPETRGWAKTSFFFGNLLERFLT* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2032 445 Gene3D - 128 201 - -
Gso4g2032 445 Gene3D - 337 418 - -
Gso4g2032 445 CDD ACT_ACR_3 262 336 - -
Gso4g2032 445 ProSiteProfiles ACT domain profile. 130 209 IPR002912 -
Gso4g2032 445 SUPERFAMILY ACT-like 125 201 IPR045865 -
Gso4g2032 445 Coils Coil 174 194 - -
Gso4g2032 445 ProSiteProfiles ACT domain profile. 342 419 IPR002912 -
Gso4g2032 445 SUPERFAMILY ACT-like 32 106 IPR045865 -
Gso4g2032 445 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Gso4g2032 445 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 445 IPR040217 -
Gso4g2032 445 SUPERFAMILY ACT-like 338 408 IPR045865 -
Gso4g2032 445 CDD ACT_ACR_4 340 411 - -
Gso4g2032 445 CDD ACT_ACR_1 35 105 - -
Gso4g2032 445 Pfam ACT domain 37 85 IPR002912 -
Gso4g2032 445 Pfam ACT domain 130 198 IPR002912 -
Gso4g2032 445 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2032 Gso-Chr4 50701894 50710161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2032 - - gmx:100789173 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2032 4 50701894 50710161 Gso4g2032 4 50701894 50710161 ECH
Gso4g2032 4 50701894 50710161 Gso6g1017 6 9890574 9898663 GST
Gso13g0205 13 11380083 11391833 Gso4g2032 4 50701894 50710161 PCT
Gso4g2032 4 50701894 50710161 Gso13g0205 13 11380083 11391833 PCT