Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1011 ATGGCTAACAACGCAGCTGCTTGTGCTGAGAGAGCAACTAGTGATATGCTCATTGGTCCAGACTGGGCAATCAACATAGACTTGTGTGATATCATTAATATGGACCCTGGGCAAGCCAAGGATGCTTTGAAGATACTCAAGAAGCGTTTGGGCAGTAAAAATCCAAAAATACAGCTTCTGGCTCTTTTTGTACTGGAGACCCTTAGTAAAAATTGTGGTGAAAGTGTATTTCAGCAGATCGTTGAGCGAGATATCTTACATGAAATGGTTAAGATAGTAAAGAAGAAGCCGGATTTAAATGTGAGGGAAAAAATACTGATTTTAATTGATACATGGCAAGAAGCTTTTGGGGGCTATGGAGTTTATCCTCAATACTATGCAGCATATAATGAATTGAAGTCTGCTGGAGTTGAATTTCCACCACGGGATGAGAATAGTGTACCATTCTTCACTCCCGCTCAAACTCAGCCAATTATTCATTCTGCTGCAGAATATGATGATGCTACTATTCAGGCTTCTCTTCAGTCAGATGCATCTGACCTTAGTTTGCTAGAGATTCAAAATGCTCAAGGACTAGCTGATGTATTGATGGAAATGCTTAGCGCCTTGAATCCTAAAGACCGTGAGGGTGTGAAGGAGGAAGTGATTGTTGATCTTGTTGACCAATGCCGTTCGTACCAAAAGCGTGTCATGCTTCTTGTGAACAATACTACGGATGAGCAGCTTTTGGGTCAGGGATTGGCACTGAATGACAGCCTTCAGCGAGTACTCAGTCGACATGATGACATTGTGAAAGGAACTGCTGATTCTGGTGCTAGAGAAGCAGAAACTTCAGTTCTGCCACTTGTAAATGTAAACCATGAAGATGATGAATCAGAGGACGATTTTGCTCAACTAGCCCATAGGTCATCACGTGATACTCAGGCACCGAATCGGAAACCAGCCTATGACAAGGCAGAACCTGGGAGGATAAACCCACTCATTCCCCCACCACCAGCATCAAAGAAGCCAGTCTACTCTGGCACTGGCATGGTTGACTATCTCAGTGGTGATACATACAAGACAGAAGGATCTCCTGAAAACTCAGAACCCACTTCATTTGCAGCTCCCCTTCATTCTTGCCCTAATCCAACCTCATCAACTATTCCATCTCTGTCTTCCTCTCGTCCTCATGCCATGAGTACCTCATCTCCAATTTTGAGCAGCCAGCCTGTGTATGATGAACAACCATCTTCTGTGGACAAATCTTCAGAGGGTCTGCCTGCAGCTCCCTGGGACGCTCAATCTCCTGGCATCATTCCGCCCCCACCTTCAAAGTATAATCAGAGACAACAGTTTTTTGAACAACAAGGTGCATCTCATTCAAGTAGTGGATCCAATTCCTCGTCTGACAGCTTGGTGGGACAAACTCAAAATCTCTCCCTGAATTCATCCTCCCCAACCAAACAACAGAAGCCAGAAGATGCCCTTTTCAAGGATCTTGTTGATTTTGCAAAATCCAAAACCTCATCATCTTCCAAACCCAATAGGTCATATTGA 1539 0.4399 MANNAAACAERATSDMLIGPDWAINIDLCDIINMDPGQAKDALKILKKRLGSKNPKIQLLALFVLETLSKNCGESVFQQIVERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGYGVYPQYYAAYNELKSAGVEFPPRDENSVPFFTPAQTQPIIHSAAEYDDATIQASLQSDASDLSLLEIQNAQGLADVLMEMLSALNPKDREGVKEEVIVDLVDQCRSYQKRVMLLVNNTTDEQLLGQGLALNDSLQRVLSRHDDIVKGTADSGAREAETSVLPLVNVNHEDDESEDDFAQLAHRSSRDTQAPNRKPAYDKAEPGRINPLIPPPPASKKPVYSGTGMVDYLSGDTYKTEGSPENSEPTSFAAPLHSCPNPTSSTIPSLSSSRPHAMSTSSPILSSQPVYDEQPSSVDKSSEGLPAAPWDAQSPGIIPPPPSKYNQRQQFFEQQGASHSSSGSNSSSDSLVGQTQNLSLNSSSPTKQQKPEDALFKDLVDFAKSKTSSSSKPNRSY* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1011 512 Gene3D - 2 150 IPR008942 -
Gso6g1011 512 SUPERFAMILY ENTH/VHS domain 8 141 IPR008942 -
Gso6g1011 512 CDD GAT_GGA_like_plant 185 263 - -
Gso6g1011 512 CDD VHS 10 134 - -
Gso6g1011 512 MobiDBLite consensus disorder prediction 498 512 - -
Gso6g1011 512 SMART VHS_2 5 136 IPR002014 GO:0035091|GO:0043130
Gso6g1011 512 Gene3D - 174 272 IPR038425 -
Gso6g1011 512 ProSiteProfiles GAT domain profile. 177 265 IPR004152 GO:0035091|GO:0043130
Gso6g1011 512 Pfam GAT domain 192 266 IPR004152 GO:0035091|GO:0043130
Gso6g1011 512 MobiDBLite consensus disorder prediction 294 319 - -
Gso6g1011 512 MobiDBLite consensus disorder prediction 354 416 - -
Gso6g1011 512 MobiDBLite consensus disorder prediction 287 512 - -
Gso6g1011 512 MobiDBLite consensus disorder prediction 438 485 - -
Gso6g1011 512 PIRSF TOM1 1 511 IPR014645 -
Gso6g1011 512 Pfam VHS domain 9 135 IPR002014 GO:0035091|GO:0043130
Gso6g1011 512 PANTHER TOM1-LIKE PROTEIN 4 1 511 - -
Gso6g1011 512 PANTHER TOM1-LIKE PROTEIN 1 511 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gso6g1011 512 ProSiteProfiles VHS domain profile. 12 140 IPR002014 GO:0035091|GO:0043130
Gso6g1011 512 SUPERFAMILY GAT-like domain 140 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1011 Gso-Chr6 9814857 9822253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1011 - - gmx:100795713 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2040 4 50778486 50793999 Gso6g1011 6 9814857 9822253 GST
Gso13g0201 13 11160725 11168839 Gso6g1011 6 9814857 9822253 PCT
Gso6g1011 6 9814857 9822253 Gso13g0201 13 11160725 11168839 PCT