Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0890 ATGGCTGCTGAAGTATATTACCAGGCTATTGGCACTTTGCAGTCCCATTCTTATCTGAATAATTTAAATAATCACCAAAAACATCAAAACAATTTAGTAAGATTGGTGGCTAGGGATTTTATCAGCAGTAATGGCTTGTCAACGAGAAGAAGTAACCGCTCTGGCCAGAGGAATTGTTGTGTAATTCAATCCCTAGCTTCGCAAACATCAGTGGTTGATCCAGTGTTGTCCCCTTCAAGAAGCAACATTGGTGACACTCACAAGAAATCAAATGAAGCTGCTTTAATCCTTATTCGCCATGGTGAGTCGTTATGGAATGAGAAGAACTTATTCACAGGGTGTGTTGATGTCCCTCTCAGCAAGAAGGGTATAGATGAGGCAATTGAAGCTGGACAAAGAATTAGCAGCATTCCTGTTGATGTCATATTTACATCGGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGTGGGAAGGTCCCTATCTTTATGCATAATGAGAGTGAACAAGCAAGGTCATGGAGTCAAGTGTTTAGTGAAGATACAAAGAAACAGTCCATTCCAGTCATAGCAGCTTGGCAACTAAATGAAAGAATGTATGGGGAGCTGCAGGGTCTCAATAAGCAAGAAACAGCAGACAGATACGGGAAAGAACAAGTCCATGAGTGGCGACGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGAGCAGTTGCCTATTTCAGAGATCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTTCAGCCCATGGGAATTCATTGAGATCCATTATCATGTACCTTGATAAATTAACTTCCCAAGAGGTCATTAGTTTGGAACTGTCAACTGGAATTCCCATGCTTTACATTTTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCCATAGGACCTTCCGAAGCTGGAGTTTATGCCTATACTAGGCGTTTGGCTCTTTACAAGCAGAAGTTGGATGACATGTTCCAATGA 1038 0.4171 MAAEVYYQAIGTLQSHSYLNNLNNHQKHQNNLVRLVARDFISSNGLSTRRSNRSGQRNCCVIQSLASQTSVVDPVLSPSRSNIGDTHKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGQRISSIPVDVIFTSALIRAQMTAMLAMTQHRRGKVPIFMHNESEQARSWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPSEAGVYAYTRRLALYKQKLDDMFQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0890 345 SUPERFAMILY Phosphoglycerate mutase-like 95 311 IPR029033 -
Gso6g0890 345 PANTHER PHOSPHOGLYCERATE MUTASE 1 344 IPR005952 GO:0004619|GO:0006096|GO:0016868
Gso6g0890 345 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 97 106 IPR001345 GO:0003824
Gso6g0890 345 Gene3D - 84 318 IPR029033 -
Gso6g0890 345 CDD HP_PGM_like 95 314 IPR013078 -
Gso6g0890 345 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 1 344 - -
Gso6g0890 345 SMART PGAM_5 94 280 IPR013078 -
Gso6g0890 345 Pfam Histidine phosphatase superfamily (branch 1) 95 162 IPR013078 -
Gso6g0890 345 Pfam Histidine phosphatase superfamily (branch 1) 190 298 IPR013078 -
Gso6g0890 345 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 92 319 IPR005952 GO:0004619|GO:0006096|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0890 Gso-Chr6 8499737 8504026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0890 K01834 - gmx:100802621 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0905 4 9907846 9911742 Gso6g0890 6 8499737 8504026 GST
Gso13g0613 13 20012671 20016792 Gso6g0890 6 8499737 8504026 PCT
Gso6g0890 6 8499737 8504026 Gso13g0613 13 20012671 20016792 PCT