Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0613 ATGGCTGCTGGAGTGTATAACCAACCAATTGTTGCTTTTCAATCCCATTCTCACATCAACAATTTTAATCATCAGCAAAAGTTTAATAATTTGGTAAGACTGGTGACAAAGGACTTTATCGGCAGTAATTTCCTCTCAAGAAGGGATTGTAGAGTAATTCAATCTTTAGCATCTCAAACATCTGTGGTTGACACAGTTTCATCCCCTTCAAAAAGCAAAACTAGTGATAGAGACACTCACAAGAAATCAAATGAAGCTTCTTTAATCCTTATTCGACATGGTGAATCCTTGTGGAACGAAAAGAACTTGTTCACAGGCTGTGTTGATGTCCCTCTAAGCAAGAGGGGTATAGATGAGGCAATTGAAGCTGGCAAAAGAATTAGCAGTATTCCTGTGGATCTCATATTTACATCTGCTTTGATTCGAGCGCAGATGACAGCCATGCTTGCCATGACACAGCACCGCCGCAGGAAGGTGCCTATCATAATGCACAATGAAAGTGAACAAGCAAGGGGATGGAGTCAAGTTTTTAGTGAGGATACAGAAAAGCAATCCATTCCAGTCATAGCAGCTTGGCAATTGAATGAAAGAATGTATGGGGAACTACAGGGTCTCAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTACATGAGTGGCGTCGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGGGCAGTTTCCTATTTCAGAGACCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTTCAGCTCATGGGAATTCACTGAGATCCATTATTATGTATCTTGACAAACTAACTTCCCAAGAGGTGATTAGTTTAGAATTGTCAACTGGAATTCCAATGCTTTACATTTTTAAAGAAGGAAGATTCGTTAGGAGAGGGAGTCCGATAGGGCCCACTGAAGCAGGAGTTTATGCCTACACTAGGCGTTTGGCTCTTTACAGGCAGAGGTTGGATGATATGTTCCAATAA 1017 0.4041 MAAGVYNQPIVAFQSHSHINNFNHQQKFNNLVRLVTKDFIGSNFLSRRDCRVIQSLASQTSVVDTVSSPSKSKTSDRDTHKKSNEASLILIRHGESLWNEKNLFTGCVDVPLSKRGIDEAIEAGKRISSIPVDLIFTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARGWSQVFSEDTEKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVSYFRDQIEPQLLSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFVRRGSPIGPTEAGVYAYTRRLALYRQRLDDMFQ* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0613 338 CDD HP_PGM_like 88 307 IPR013078 -
Gso13g0613 338 Pfam Histidine phosphatase superfamily (branch 1) 88 161 IPR013078 -
Gso13g0613 338 Pfam Histidine phosphatase superfamily (branch 1) 183 292 IPR013078 -
Gso13g0613 338 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 45 337 - -
Gso13g0613 338 SUPERFAMILY Phosphoglycerate mutase-like 88 304 IPR029033 -
Gso13g0613 338 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 85 312 IPR005952 GO:0004619|GO:0006096|GO:0016868
Gso13g0613 338 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 90 99 IPR001345 GO:0003824
Gso13g0613 338 Gene3D - 77 311 IPR029033 -
Gso13g0613 338 PANTHER PHOSPHOGLYCERATE MUTASE 45 337 IPR005952 GO:0004619|GO:0006096|GO:0016868
Gso13g0613 338 SMART PGAM_5 87 273 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0613 Gso-Chr13 20012671 20016792 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0613 K01834 - gmx:100784422 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0613 13 20012671 20016792 Gso4g0905 4 9907846 9911742 PCT
Gso13g0613 13 20012671 20016792 Gso6g0890 6 8499737 8504026 PCT
Gso4g0905 4 9907846 9911742 Gso13g0613 13 20012671 20016792 PCT
Gso6g0890 6 8499737 8504026 Gso13g0613 13 20012671 20016792 PCT