Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0905 ATGGCTGCTGAAGTATATTACCAGGCTATTGGTACTTTGCAGTCCCATTCTTATCTGAATAATTTAAATCATCACCAAAAGCATCAAAACAATTTAGTAACATTGGTGTCTAGGGATTTTATCAGCAGTAATGGCTTGTCAACGAGAAGAAGTAACTGCACTGGCCAGAGGAATTGTAGTGTAATTCGATCTCTAGCTTCGCAAACATCAGTCGTTGATCCAGTGTTGTCCCCTTCAAGAAGCAATGCTGGTGACACTTACAAGAAATCAACTTTAATCCTTATTCGGCATGGTGAGTCGTTATGGAATGAGAAGAACTTATTCACAGGGTGTGTTGATGTCCCTCTAAGCAAGAAGGGTATAGATGAGGCAATTGAAGCTGGAAAAAGAATTAGCAGCATTCCTGTTGATGTAATATTTACATCAGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGTGGGAAGGTCCCTATCATGATGCACAATGAGAGTGAACAAGCAAGGTCATGGAGTCAAGTGTTTAGTGAAGATACAAAAGAGCAGTCCATTCCAGTCATAGCATCTTGGCAACTAAATGAAAGAATGTATGGGGAGCTGCAGGGTCTCAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTCCATGAGTGGCGACGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGAGCAGTTGCCTATTTCAGAGACCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTTCAGCCCATGGGAATTCATTGAGATCCATTATCATGTACCTTGATAAATTAACTTCCCAAGAGGTCATTAGTTTGGAACTGTCAACTGGAATTCCCATGCTTTACATTTTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCCATAGGACCTTCTGAAGCTGGAGTTTATGCCTATACTAGGCGTTTGGCTCTTTACAAGCAGAAGTTGGACAACATGTTCCAATGA 1029 0.413 MAAEVYYQAIGTLQSHSYLNNLNHHQKHQNNLVTLVSRDFISSNGLSTRRSNCTGQRNCSVIRSLASQTSVVDPVLSPSRSNAGDTYKKSTLILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRGKVPIMMHNESEQARSWSQVFSEDTKEQSIPVIASWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPSEAGVYAYTRRLALYKQKLDNMFQ* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0905 342 SMART PGAM_5 91 277 IPR013078 -
Gso4g0905 342 Pfam Histidine phosphatase superfamily (branch 1) 187 295 IPR013078 -
Gso4g0905 342 Pfam Histidine phosphatase superfamily (branch 1) 92 159 IPR013078 -
Gso4g0905 342 Gene3D - 83 314 IPR029033 -
Gso4g0905 342 PANTHER PHOSPHOGLYCERATE MUTASE 1 341 IPR005952 GO:0004619|GO:0006096|GO:0016868
Gso4g0905 342 SUPERFAMILY Phosphoglycerate mutase-like 91 308 IPR029033 -
Gso4g0905 342 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 89 316 IPR005952 GO:0004619|GO:0006096|GO:0016868
Gso4g0905 342 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 94 103 IPR001345 GO:0003824
Gso4g0905 342 CDD HP_PGM_like 91 311 IPR013078 -
Gso4g0905 342 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 1 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0905 Gso-Chr4 9907846 9911742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0905 K01834 - gmx:100777582 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0905 4 9907846 9911742 Gso4g0905 4 9907846 9911742 ECH
Gso4g0905 4 9907846 9911742 Gso6g0890 6 8499737 8504026 GST
Gso13g0613 13 20012671 20016792 Gso4g0905 4 9907846 9911742 PCT
Gso4g0905 4 9907846 9911742 Gso13g0613 13 20012671 20016792 PCT