Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0841 ATGGCATTCTCTAGTGCTTTGATTCTGTGGTCGTTGCTAGCAATCAACATGGCCCTGCCAACCCTCGCAACCGTCTACACCGTGGGAGATACTTCAGGTTGGGCAATTGGTACTGATTATAGCACTTGGACTGGCGACAAGATCTTTTCAGTGGGTGATAGTCTCGCGTTCAACTATGGAGCTGGGCACACAGTGGATGAAGTTAAAGAGAGCGATTACAAGTCGTGCACCGCAGGGAATTCTATTAGCACAGACAGTAGTGGTGCGACCACAATTGCCCTTAAAAGTGCAGGCACTCATTACTTCATATGTTCTGTTCCTGGACATTGTTCTGGCGGTATGAAACTTGCCGTCACTGTCAAATCAGGAAAAGCCTCTGATGCCACACCCACTACTTCCACTACTACCGCCACTAAATCAAACTCGTCTTCAGCGAGTAGTGTCTCACCAATTGTTGCTATGTTCATTGTTTCCTCGATCTCTTACTATGTTTTGCGTATGCTATAA 507 0.4655 MAFSSALILWSLLAINMALPTLATVYTVGDTSGWAIGTDYSTWTGDKIFSVGDSLAFNYGAGHTVDEVKESDYKSCTAGNSISTDSSGATTIALKSAGTHYFICSVPGHCSGGMKLAVTVKSGKASDATPTTSTTTATKSNSSSASSVSPIVAMFIVSSISYYVLRML* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0841 168 MobiDBLite consensus disorder prediction 125 144 - -
Gso6g0841 168 PANTHER BLUE COPPER PROTEIN 11 135 IPR039391 GO:0009055
Gso6g0841 168 Gene3D - 22 127 IPR008972 -
Gso6g0841 168 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Gso6g0841 168 CDD Phytocyanin 24 120 - -
Gso6g0841 168 PANTHER BLUE COPPER PROTEIN-LIKE 11 135 - -
Gso6g0841 168 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Gso6g0841 168 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Gso6g0841 168 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0841 Gso-Chr6 8005019 8005906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0841 31 122 Miscellaneous Gene Families AT1G22480 68.478 1.21e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0841 - - gmx:100306522 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0841 4 8924676 8931245 Gso6g0841 6 8005019 8005906 GST
Gso14g1494 14 46169005 46170494 Gso6g0841 6 8005019 8005906 PCT
Gso2g1787 2 41591323 41592775 Gso6g0841 6 8005019 8005906 PCT
Gso6g0841 6 8005019 8005906 Gso14g1494 14 46169005 46170494 PCT
Gso6g0841 6 8005019 8005906 Gso2g1787 2 41591323 41592775 PCT