Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1787 ATGGCAATTTCTGTTGCTTTAATTTTGGGTCTATGTTTAGCAATGAACATGGCCCTGCCGACAGGTGCAGCTACCCACACGGTGGGAGACACCTCAGGTTGGGCACTCGGTGTTGATTACAGCACATGGGCTAGTGGCTTGAAATTTAAAGTTGGTGATAGTCTTGTTTTCAATTATGGGACTGGTCACACGGTGGACGAAGTAAAAGAAAGCGATTACAAGAGTTGCACAATGGGCAATTCACTGAGCACAGACAGCAGCGGCGCCACCACAATCACCCTCAAGACCGCCGGCACTCACTACTTCATGTGTGCTGCTCCTGGCCATTGTGACGGTGGCATGAAGCTTGCTGTTAAGGTAAAGGCTAAAAATGCCTCTGCTTCTGCTGCAGCACCTTCACCTGCAAAGGAATCACCTTCAGAATCTGATGATGCCAAAGACACACCCACTACTCCTACCTCCACCACCAATCCTAAAACTTCAACATCCACCACCCCTTCAACTGAAACCTCCACTACTACTACATCTTCTTATACGTCATCAGCAATTGGCGGCTCACCGATTGTTGCTATGTTTGTTGTTTCTTGGATCTCATACTTGTTGCTTATGATGTGA 615 0.4748 MAISVALILGLCLAMNMALPTGAATHTVGDTSGWALGVDYSTWASGLKFKVGDSLVFNYGTGHTVDEVKESDYKSCTMGNSLSTDSSGATTITLKTAGTHYFMCAAPGHCDGGMKLAVKVKAKNASASAAAPSPAKESPSESDDAKDTPTTPTSTTNPKTSTSTTPSTETSTTTTSSYTSSAIGGSPIVAMFVVSWISYLLLMM* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1787 204 Pfam Plastocyanin-like domain 36 114 IPR003245 GO:0009055
Gso2g1787 204 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Gso2g1787 204 MobiDBLite consensus disorder prediction 145 180 - -
Gso2g1787 204 PANTHER BLUE COPPER PROTEIN 9 171 IPR039391 GO:0009055
Gso2g1787 204 Gene3D - 22 127 IPR008972 -
Gso2g1787 204 CDD Phytocyanin 24 120 - -
Gso2g1787 204 PANTHER BLUE COPPER PROTEIN-LIKE 9 171 - -
Gso2g1787 204 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Gso2g1787 204 MobiDBLite consensus disorder prediction 127 180 - -
Gso2g1787 204 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1787 Gso-Chr2 41591323 41592775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1787 8 129 Miscellaneous Gene Families AT1G22480 51.639 5.06e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1787 - - gmx:100305666 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1494 14 46169005 46170494 Gso2g1787 2 41591323 41592775 GST
Gso2g1787 2 41591323 41592775 Gso4g0841 4 8924676 8931245 PCT
Gso2g1787 2 41591323 41592775 Gso6g0841 6 8005019 8005906 PCT
Gso4g0841 4 8924676 8931245 Gso2g1787 2 41591323 41592775 PCT
Gso6g0841 6 8005019 8005906 Gso2g1787 2 41591323 41592775 PCT