Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0841 ATGGCATTCTCTAGTGCTTTGGTTTTGGGCTCATTGCTAGCAATCAACATGGGCCTGCCAACCCTTGCAATCGACTACACTGTGGGAGATACTTCAGGTTGGGCAATTGGTGCTGATTATAGCACATGGACTGGTGACAAGACCTTTGCAGTGGGTGATAGTCTTGTGTTCAAGTATGGAGGAGGAGGAGGGCACACAGTGGATGAGGTTAAAGAGAGCGAGTACAAGTCGTGCACAGCAGGGAATTCGATTAGCACAGACAGTAGTGGTGAGACCACAATTACTCTTAAAACCGCAGGCACTCATTACTTCATATGTTCTGTTCCTGGACATTGTTCTGGCGGCATGAAACTTGTCGTCACTGTCAAATCAGGAAAAGCCACTGATTCTTCTTCAACTTCAACTGGGAAGGCTTCACCTTCTGATGTCACACCCAACACCACTAAATCAAACTCGTCTTCAGCGAGTGGTGTCTCACCAATTGTTGCTATGTTTATTGTTTCGTGGATCTCTTACAATGTTTTGTATGGTATAAGTTTCCCCCACTCAGCCAGGACAGAGGTAGTGCTCTCACCGTTTCTTAATTTCCTTATAATAATAATAATTACGATTATTATTACTATTGTCACTCTGTTTTCTGGTTTGATTTATTCAGATTTATCTATGAGTACTAATTAA 678 0.4263 MAFSSALVLGSLLAINMGLPTLAIDYTVGDTSGWAIGADYSTWTGDKTFAVGDSLVFKYGGGGGHTVDEVKESEYKSCTAGNSISTDSSGETTITLKTAGTHYFICSVPGHCSGGMKLVVTVKSGKATDSSSTSTGKASPSDVTPNTTKSNSSSASGVSPIVAMFIVSWISYNVLYGISFPHSARTEVVLSPFLNFLIIIIITIIITIVTLFSGLIYSDLSMSTN* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0841 225 ProSitePatterns Type-1 copper (blue) proteins signature. 100 116 IPR028871 -
Gso4g0841 225 ProSiteProfiles Phytocyanin domain profile. 24 124 IPR003245 GO:0009055
Gso4g0841 225 PANTHER BLUE COPPER PROTEIN 4 146 IPR039391 GO:0009055
Gso4g0841 225 MobiDBLite consensus disorder prediction 127 156 - -
Gso4g0841 225 Pfam Plastocyanin-like domain 34 116 IPR003245 GO:0009055
Gso4g0841 225 Gene3D - 22 129 IPR008972 -
Gso4g0841 225 PANTHER BLUE COPPER PROTEIN-LIKE 4 146 - -
Gso4g0841 225 SUPERFAMILY Cupredoxins 23 122 IPR008972 -
Gso4g0841 225 CDD Phytocyanin 25 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0841 Gso-Chr4 8924676 8931245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0841 31 169 Miscellaneous Gene Families AT1G22480 47.552 3.41e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0841 - - gsj:114408099 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0841 4 8924676 8931245 Gso4g0841 4 8924676 8931245 ECH
Gso4g0841 4 8924676 8931245 Gso6g0841 6 8005019 8005906 GST
Gso14g1494 14 46169005 46170494 Gso4g0841 4 8924676 8931245 PCT
Gso2g1787 2 41591323 41592775 Gso4g0841 4 8924676 8931245 PCT
Gso4g0841 4 8924676 8931245 Gso14g1494 14 46169005 46170494 PCT
Gso4g0841 4 8924676 8931245 Gso2g1787 2 41591323 41592775 PCT