Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0624 ATGCTGAGGAAGAGGAACAGGTCAGTGCAGAAGGATCAACACCTCATGTGTGAAGTCAATTCGGAGCACTATTCTCAATCTCATCATGCTTTGGGGCGAAACAACATTAAGGGCCACTCAATTTTCAATGTCCCTTGTCTTTTTGTGGGTCTAGGTCCAAAAGGCTTGTTGGATTCTGATTCAGTTAGGAGCCCCACTTCTCCACTCGATGATGCTAGAGTTCTTTCAAATCTAGGCAAGAACCCTGTTAGGAAGCCAAGATCTTCACACCATGAAAGGAGCTGGGATTGTTGCAAAGTAGGTCTAGGCATTGTGGAGTCTTTGGAAGACTGTTCTAGTTCTAGGTTTTCTGGGAAAATTCTCCAGTCACCAGAGAGCAAGAGAGTTAGTCTCAGTCCCCAAATGATGATGATCAAAGCCCCAAATTGCCAAATCCACAGGGATTCTTCTCTTGAGGGATCTAAGTCTTTGCCCAAAGATTTTTGTAAGGCTCCTCCTTATTATGCCCACCAAAATGGATCTGTTGTTATCCACAAGGGTGAATGTGAATCTGAGTCCACTGTTCTTTTTGAGATTGGGGAAAGTGGCCTTGAGCTTGAGCCGTTTGGGAGAACCAGGTCTTGTTCATTGGACTCATGCAGTCCACTGAAAGCTCTCTCTGGTGTAACCACTTTTTATTCTAATTCAGACACTGATAATAATTTTGCTGTGAAAGATGTGAGCTCCCCTCCTCGTTTTATTGGAGGAAGCCAGAACTCAAATAATAACTTCACACCTACAAAGCTGAATTCAACCACACTTTCCATTAGCCCTTCCAATGATATCATCAAGTCTCTATCAGCTAGTGAGATTGAACTATCTGAGGACTACACTTGTGTGATTTCCCATGGCCCCAATCCCAAAACAACTCACATTTTTGGGGATTGCATTTTGGAGACTCATTCTAATGCATTTAAAACCCATTTCAAGAATGAAGAGAAGGAGCATGGAGTGAAGCCATTGGGTAGCAACAAGTTAGGGAGTCCTAAGCCATATCCCTCTAGTGACTTCTTAAGTTTCTGCCACCATTGCAACAAGAAACTTGAAGAGGGGAAAGACATTTATATTTATGGGGGTGAAAAGGCATTTTGCAGTTTAACTTGCCGTGCCATGGAGATCATGATTGATGAGGAACTAGAGAAATCCAACACCAACCCTCCTTGTGAAAGCTCTCCAAAGCCAAAACTTGGTGAGCTGCTTTTTGAAACAGGAATTCTCACAGCTACATAA 1269 0.4295 MLRKRNRSVQKDQHLMCEVNSEHYSQSHHALGRNNIKGHSIFNVPCLFVGLGPKGLLDSDSVRSPTSPLDDARVLSNLGKNPVRKPRSSHHERSWDCCKVGLGIVESLEDCSSSRFSGKILQSPESKRVSLSPQMMMIKAPNCQIHRDSSLEGSKSLPKDFCKAPPYYAHQNGSVVIHKGECESESTVLFEIGESGLELEPFGRTRSCSLDSCSPLKALSGVTTFYSNSDTDNNFAVKDVSSPPRFIGGSQNSNNNFTPTKLNSTTLSISPSNDIIKSLSASEIELSEDYTCVISHGPNPKTTHIFGDCILETHSNAFKTHFKNEEKEHGVKPLGSNKLGSPKPYPSSDFLSFCHHCNKKLEEGKDIYIYGGEKAFCSLTCRAMEIMIDEELEKSNTNPPCESSPKPKLGELLFETGILTAT* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0624 422 MobiDBLite consensus disorder prediction 61 90 - -
Gso6g0624 422 Pfam zinc-finger of the FCS-type, C2-C2 343 391 IPR007650 -
Gso6g0624 422 ProSiteProfiles Zinc finger FLZ-type profile. 349 393 IPR007650 -
Gso6g0624 422 PANTHER DUF581 FAMILY PROTEIN 1 416 - -
Gso6g0624 422 PANTHER FCS-LIKE ZINC FINGER 11 1 416 IPR044585 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0624 Gso-Chr6 5785882 5788375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0624 - - gmx:100812576 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0624 4 6069908 6072359 Gso6g0624 6 5785882 5788375 GST
Gso14g1060 14 18368752 18371443 Gso6g0624 6 5785882 5788375 PCT
Gso17g1718 17 32533765 32536526 Gso6g0624 6 5785882 5788375 PCT
Gso6g0624 6 5785882 5788375 Gso14g1060 14 18368752 18371443 PCT
Gso6g0624 6 5785882 5788375 Gso17g1718 17 32533765 32536526 PCT