Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0624 ATGCTGAGGAAGAGGAACAGGTCAGTGCAGAAGGATCAACACCACATGTGTGAAGCCAATTCGGAGCACTATTCTCAATCTCATCATGCTTTGGTGGGGCGCAACAACATCAAGGGACACTCAATTTTCAATGTCCCTTGTCTGTTTGTGGGTCTTGGTCCAAAAGGGTTGTTGGATTCTGATTCAGTTAGGAGCCCCACTTCTCCACTTGATGCTAGAGTTCTTTCAAATCTAGGCAATCCTGTTAGGAAGCCAAGATCTTCACCTCATGAAAAGAGGTGGGATTGTTGCAAAGTAGGTCTAGGCATTGTGGAGTCTTTGGAAGACTGTTCTAGGTTTTCTGGGAAAATTCTCCAGTCACCAGAGAGCAAGAGAGTTAGTCTCAGCCCCCAAATTATGATCAAAGCCCCAAATTGCCAAATCCATAGGGATTCTTTTGAGGGATCTAAGTCTTTGCCCAAGGATTTCTGTAAGGCTCCTTATTATGCCCCCCAAAATGGATCTGTTATCCACAAGGGTGAATGTGAATCTGAGTCCACTGTTCTTTTTGAGATTGGGGAAAGTGGCCTTGAGCTTGAGCTGTTTGGGAAAACCAGGTCTTGTTCATTGGACTCATGCAGTCCACTGAAAGCTCTCTCTGGTGTTGCCACTTCCTATTCTGATTCAGACACTGATAATTTTGCTATGAAAGATGTGAGCTCCCCTCCTCATTTTATTGGAGGAAGCCAGAACTCAAATAACTTCACACCTACAAAGCCGAATTCAACCACACTTTCCATTAGCTCTTCCAATGAATTCATCAAGTCTCTATCAGCTAGTGAGATCGAACTCTCTGAGGACTACACTTGTGTGATTTCCCATGGCCCCAATCCCAAAACAACTCACATTTTTGGGGATTGCATTTTGGAGACTCATTCTAATGTATTTAAAACCCATTTCAAGAGTGAAGAGAAGGAGAAGCGAGTGAATCCATTGGGTAACAACAAGTTAGGGAGTCCAAACCCATATCCCTCAAGTGACTTCTTAAGTTTCTGCCACCATTGCAACAAGAAACTAGAAGAGGGGAAAGACATTTATATTTATGGGGGTGAAAAGGCATTTTGCAGTTTCACGTGCCGTGCCATGGAGATCATGATTGATGAGGAACTAGAGAAATCCACTTCCAACCCTCCTTGTGAAAACTCTCCAAATCCGAAACTTGGTGAGCTACTTTTTGAAACATGA 1224 0.4346 MLRKRNRSVQKDQHHMCEANSEHYSQSHHALVGRNNIKGHSIFNVPCLFVGLGPKGLLDSDSVRSPTSPLDARVLSNLGNPVRKPRSSPHEKRWDCCKVGLGIVESLEDCSRFSGKILQSPESKRVSLSPQIMIKAPNCQIHRDSFEGSKSLPKDFCKAPYYAPQNGSVIHKGECESESTVLFEIGESGLELELFGKTRSCSLDSCSPLKALSGVATSYSDSDTDNFAMKDVSSPPHFIGGSQNSNNFTPTKPNSTTLSISSSNEFIKSLSASEIELSEDYTCVISHGPNPKTTHIFGDCILETHSNVFKTHFKSEEKEKRVNPLGNNKLGSPNPYPSSDFLSFCHHCNKKLEEGKDIYIYGGEKAFCSFTCRAMEIMIDEELEKSTSNPPCENSPNPKLGELLFET* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0624 407 PANTHER FCS-LIKE ZINC FINGER 11 1 407 IPR044585 -
Gso4g0624 407 PANTHER DUF581 FAMILY PROTEIN 1 407 - -
Gso4g0624 407 Pfam zinc-finger of the FCS-type, C2-C2 335 382 IPR007650 -
Gso4g0624 407 ProSiteProfiles Zinc finger FLZ-type profile. 340 384 IPR007650 -
Gso4g0624 407 MobiDBLite consensus disorder prediction 385 407 - -
Gso4g0624 407 MobiDBLite consensus disorder prediction 62 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0624 Gso-Chr4 6069908 6072359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0624 - - gmx:100779553 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0624 4 6069908 6072359 Gso6g0624 6 5785882 5788375 GST
Gso14g1060 14 18368752 18371443 Gso4g0624 4 6069908 6072359 PCT
Gso17g1718 17 32533765 32536526 Gso4g0624 4 6069908 6072359 PCT
Gso4g0624 4 6069908 6072359 Gso14g1060 14 18368752 18371443 PCT
Gso4g0624 4 6069908 6072359 Gso17g1718 17 32533765 32536526 PCT