Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1718 ATGCTGAGGAAGAGGACCAGGTCAATCCAGAAAGATCAACACCACACTGGTCAAATGGCAATCTCTGATACCAATTCTGAGTCTCATGCTTTGGGGAGCAATGGCAAAAGCAACTCAATTTTCAATTCCCCTCTTCTGTTTGTGGGCATGGGTCATAAGGGCTTGTTGGATTCTGATTCAGTTAAGAGCCCCACTTCACCATTAGATTTTGGTTTCCTTTCAAACCTAAGCAACCCCTTTAGAACCCCAAGTTCATTGTCCAATGAGGGACAACATAGGAGTTGGAACTGTGCCAAAGTAGGTCTAAGTATTATAGATTCTTTGGAAGAATGTTCTAAGTTTTCTGGGAAAATTCTCCAGGCTTCAGAGAGCAAGAAGACTAGTCTTTGTCCTCCAATGATTACTAAAGCCCCAAAATGTAAATCCTATATGGATTCTGCTCAGGCATCTAAATCTTTACCTAAAGATTTTTGTAAGATTACTTGTACTCAAAATGGTTCTATTTTCCCTAAGGGTGAGTCCACTGTTCTTTCTGAGATTGGAGAGGCCCCTCTAGAATATGAGTCCTTTGGGAAAACTGTGTCTTTTTCATTGGACTCTTGCAGTCCAATTAGAAATCTGTCTGGTTTAACTGGTTCCGACTTTGATTCTGACTCTGAGAATTTTGCATTGAAACAGATGTGCTCCCCTCCTCATTTTATTGGAGGAAGCCAAAATAACACAAAATTTTTGCTACCTTCTGAGGTACATTCAAACCCTGTAGCTGCAGTCTCTTCTAATGAATTTATCGAGTCTCTATCGGCTAGTGAGATTGAACTCTCTGAGGATTACACCTGTGTGATTTCCCATGGTTCTAATCCAAAAACAACCCATATTTTCTGTGACTGCATTTTGGAAAGTCATGTTAATGATTCTGAAAGACATTATAAGGCTGAAGAGGAGGGAACGGGATTGCCCCTTTTCAGTGTTAACATTTTGCATACTCCAAGCCAATATCCTTCTCATGACTTCTTAAGTGTCTGTCACCATTGCAACAAGAAGTTGGAAGATGGGAAAGATATTTACATATATAGAGGTGAAAAATCATTTTGCAGTTTGAGCTGCCGCGAAATAGAGATCACGAACGATGAGGAGCAAGAGAAATCCAATTCATCACCTGAAAACTCTCCAAAGTGGGGACTTGGAGGGAAATTTTTTTAA 1200 0.4017 MLRKRTRSIQKDQHHTGQMAISDTNSESHALGSNGKSNSIFNSPLLFVGMGHKGLLDSDSVKSPTSPLDFGFLSNLSNPFRTPSSLSNEGQHRSWNCAKVGLSIIDSLEECSKFSGKILQASESKKTSLCPPMITKAPKCKSYMDSAQASKSLPKDFCKITCTQNGSIFPKGESTVLSEIGEAPLEYESFGKTVSFSLDSCSPIRNLSGLTGSDFDSDSENFALKQMCSPPHFIGGSQNNTKFLLPSEVHSNPVAAVSSNEFIESLSASEIELSEDYTCVISHGSNPKTTHIFCDCILESHVNDSERHYKAEEEGTGLPLFSVNILHTPSQYPSHDFLSVCHHCNKKLEDGKDIYIYRGEKSFCSLSCREIEITNDEEQEKSNSSPENSPKWGLGGKFF* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1718 399 PANTHER DUF581 FAMILY PROTEIN 1 399 - -
Gso17g1718 399 Pfam zinc-finger of the FCS-type, C2-C2 330 378 IPR007650 -
Gso17g1718 399 MobiDBLite consensus disorder prediction 376 399 - -
Gso17g1718 399 MobiDBLite consensus disorder prediction 13 34 - -
Gso17g1718 399 ProSiteProfiles Zinc finger FLZ-type profile. 336 380 IPR007650 -
Gso17g1718 399 PANTHER FCS-LIKE ZINC FINGER 11 1 399 IPR044585 -
Gso17g1718 399 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1718 Gso-Chr17 32533765 32536526 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1718 - - gmx:100804101 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1060 14 18368752 18371443 Gso17g1718 17 32533765 32536526 GST
Gso17g1718 17 32533765 32536526 Gso4g0624 4 6069908 6072359 PCT
Gso17g1718 17 32533765 32536526 Gso6g0624 6 5785882 5788375 PCT
Gso4g0624 4 6069908 6072359 Gso17g1718 17 32533765 32536526 PCT
Gso6g0624 6 5785882 5788375 Gso17g1718 17 32533765 32536526 PCT