Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0611 ATGCTCAAGCAATTCCTCAGCAAACTCCCTCGCAAGGCACCGAAACCCGACTCGGACGAGTCATGCCGAGCCGACTCGTCGAGCTCGGACGATTCCCCACACGCCGCCGGCAGAAACACCCGCCCTCCCGGCGGCGGAGGAGCTTCCGGCGCCGCGAAGAAAGCATCCTCGTCGGCGGTTTTTCCGGCGAGCACGGTGTCGTTGATTGAACCTTTGGTGCCGTTTAAGGATGTTCCGAGTTCCGAAAAGATGAACCTTTTCGTGAGCAAGCTTAGCCTGTGTTGTGTCACGTTCGATTTCACGGACCCTGGTAAGAACACGGTGGAGAAAGAGGTGAAGAGAAGAACCCTTGTTGAACTCGTTGATTTCGTTTCCTCTTGTGGGTCCTCGAGGTTCGGTGAACCTGCTATTCTTGCTGTTTGCAGAATGTGTGCTATTAATCTCTTCCGTGTTTTCCCGCCAAATTATAGGTCCAATCGTGGTGGTGAGAATGATGATGATGAGCCAGCATTTGATCCCGCTTGGCCTCATTTGCAGCTTGTGTATGAATTGCTGCTTAAGTTTATAACCTCAAATTGTCTCGATGCTAAGGTGGCTAAGAAGTACATTGACCATTCGTTTATTTTAAGTTTGTTGGAGTTGTTTGATTCGGAGGATCCTAGGGAGAGGGACTGCTTGAAGACGATTCTGCATAGGGTTTATGGCAAGTTCATGGTGCATAGGCCCTACATAAGGAAATCTATTAACAACTTGTTTTATAAGTTTGTGTTTGAGACTGAGAGGCACAATGGGATTGCGGAGTTGTTGGAGATCTTTGGGAGCATAATTAGTGGGTTTGCTTTGCCTCTGAAGGAGGAGCACAAGATCTTCTTGTGGAGGGTTTTGATCCCCTTGCACAAGCCCAAGTCTATCGGGGTGTACTTCCAGCAGTTGTCTTATTGCGTTACGCAGTTTATCGAGAAAGAGCCCAAGTTGGCAAGCATTGTGATAAGGGGGATGTTGAAGTATTGGCCTGTAACCAACAGTCAGAAAGAGGTGATGTTCCTGGGTGAACTGGAGGAAATTTTGGAAACAATTAACATGGTAGAGTTCCAGAGGGTCATGGTCCCGTTGTTTTGGCGGATTGGATGCTGCATTAACAGTTTGCACTTCCAGGTAGCTGAAAGAACCCTTTTCTTATGGAACAACGACCATATTGTCAACTTGATCGCTCACAACCGACAAGTGATCCTGCCAATCATATTTCCAGCCTTAGAGAAGAATTCTCAGGGCCACTGGAGCCAGGCAGTGCTCAACCTAACTCATAACGTGAGAAAAATGTTTGTGGAGATGGATGAGAAGCTGTTCCTGGCTTCTCATTCTCAGTTCAAGGAAGAAGAAGCAATGCTAAACACAGCAGCGGAGAAGCGGAAGGAAGCATGGAAACAACTAGAGCATGCAGCCAGTCTCCAGCCTGTGACTGGAAATACCCCAGTTTTAGTGTCTCCAATTTGA 1494 0.4786 MLKQFLSKLPRKAPKPDSDESCRADSSSSDDSPHAAGRNTRPPGGGGASGAAKKASSSAVFPASTVSLIEPLVPFKDVPSSEKMNLFVSKLSLCCVTFDFTDPGKNTVEKEVKRRTLVELVDFVSSCGSSRFGEPAILAVCRMCAINLFRVFPPNYRSNRGGENDDDEPAFDPAWPHLQLVYELLLKFITSNCLDAKVAKKYIDHSFILSLLELFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSINNLFYKFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSIGVYFQQLSYCVTQFIEKEPKLASIVIRGMLKYWPVTNSQKEVMFLGELEEILETINMVEFQRVMVPLFWRIGCCINSLHFQVAERTLFLWNNDHIVNLIAHNRQVILPIIFPALEKNSQGHWSQAVLNLTHNVRKMFVEMDEKLFLASHSQFKEEEAMLNTAAEKRKEAWKQLEHAASLQPVTGNTPVLVSPI* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0611 497 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 481 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso6g0611 497 MobiDBLite consensus disorder prediction 10 27 - -
Gso6g0611 497 MobiDBLite consensus disorder prediction 1 53 - -
Gso6g0611 497 SUPERFAMILY ARM repeat 85 477 IPR016024 -
Gso6g0611 497 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 495 - -
Gso6g0611 497 Gene3D - 79 480 IPR011989 -
Gso6g0611 497 PIRSF PP2A_B56 4 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso6g0611 497 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0611 Gso-Chr6 5679046 5682484 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0611 K11584 - gmx:100808283 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0613 4 5937197 5940476 Gso6g0611 6 5679046 5682484 GST
Gso14g1046 14 17623394 17627065 Gso6g0611 6 5679046 5682484 PCT
Gso17g1734 17 33533173 33536928 Gso6g0611 6 5679046 5682484 PCT
Gso6g0611 6 5679046 5682484 Gso14g1046 14 17623394 17627065 PCT
Gso6g0611 6 5679046 5682484 Gso17g1734 17 33533173 33536928 PCT