Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1734 ATGCTCAAGCAAATCCTCAGCAAGCTTCCTCGGAAGTCGTTGAAGCCCGACTCGGACAAGTCGCCCCGAGTCGACTCGGCTCGTTCCGCCGATTCGCCACGTGCTGCCGGCAGAAGCAACAAGCCACATGGCGGAAGTTCTTCCGCCGCCAAGCGAGCTTCTTCGTCGGCGGTGTTTCCGGCGAGCATGGTGTCCGGAATTGAACCTTTGGTGCCGTTTAAGGATGTTCCTAATGCTGAGAAGATGAACCTGTTTGTGAGCAAATTGAGCCTTTGTTGTGTCACATTTGATTTCACTGACCCTAGTAAAAGCAGTGCAGATAAAGATGTGAAAAGGAAGACTTTGGTTGAGCTTGTTGATTTTGTGGCTTGTGGGACAATGAGGTTTAGTGAGCCTGCTATTCTTGCTATCTGTAGAATGTGTGCTATTAATTTGTTTAGAGTTTTCCCTCCTAATTATAGGGCAAGTGGTGGTGGTGAGAATGATGATGATGAGCCTCTGTTTGATCCTGCTTGGCCACATTTGCAGCTTGTGTATGAATTGCTGCTTAAGTTTATCTCTTCCTCATGCATCGATGCGAAGGTGGCGAAAAAATATATTGATCACTCCTTTATTGCCAGATTGCTTGAATTGTTTGATTCGGAGGATCCTAGGGAAAGGGATTGCTTAAAGACTATTCTGCATAGGATTTATGGAAAGTTCATGGTGCATAGACCGTATATACGGAAATCTATTAACAATATATTTTATCGGTTCGTGTTTGAGACTGATAAGCCCAATGGGATTGGTGAGCTGTTGGAGATTTTTGGGAGCGTGATTACTGGGTTTGCTTTGCCCTTGAAAGAGGAACACAAAATCTTCTTGTGGAGGGTTTTGGTCCCCTTGCACAAGCCGAAATCTATTGGGGCCTACTTTCAGCAATTGTCCTACTGTGTTATGCAGTTTATAGAGAAGGAGCCAAAGTTAGCGAGCATTGTGATAAGGGGATTGTTGAAATATTGGCCAGCAACAAATAGCCAGAAAGAGGTGATGTTTCTGGGTGAACTGGAAGAAATTTTGGAAGTAATTAACATGGTAGAGTTCCAGAGGATCATGGTCCCTTTGTTTAGGCGGATCGGGTGCTGCATTAACAGTTTACACTTTCAGGTAGCTGAAAGGGCTCTTTTCTTATGGAACAATGACCACATTGTCAACTTGATTGCACATAACCGACAAGTGATCCTGCCCATCATATTTTCAGCTTTAGACAGGAATGTTCAAAGCCATTGGAACCCGGCAGTCGTCAACCTAACTCACAATATTAGAAAGATGTTCTTGGAGATGGATGAGAAGTTCTTCATTTCTTGTCATAATCACTTTAAGGAGGAAGAAGCAATCTTGATCTCAACAGGGGAGAAGCGAAAGGAGGCATGGAAACAACTAGAGCATGCAGCCAGTCTAAGGCCAGTAACTGGAAACACTGCAGTTTTAGTGTCCTGA 1479 0.4429 MLKQILSKLPRKSLKPDSDKSPRVDSARSADSPRAAGRSNKPHGGSSSAAKRASSSAVFPASMVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPSKSSADKDVKRKTLVELVDFVACGTMRFSEPAILAICRMCAINLFRVFPPNYRASGGGENDDDEPLFDPAWPHLQLVYELLLKFISSSCIDAKVAKKYIDHSFIARLLELFDSEDPRERDCLKTILHRIYGKFMVHRPYIRKSINNIFYRFVFETDKPNGIGELLEIFGSVITGFALPLKEEHKIFLWRVLVPLHKPKSIGAYFQQLSYCVMQFIEKEPKLASIVIRGLLKYWPATNSQKEVMFLGELEEILEVINMVEFQRIMVPLFRRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFSALDRNVQSHWNPAVVNLTHNIRKMFLEMDEKFFISCHNHFKEEEAILISTGEKRKEAWKQLEHAASLRPVTGNTAVLVS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1734 492 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 492 - -
Gso17g1734 492 MobiDBLite consensus disorder prediction 1 51 - -
Gso17g1734 492 MobiDBLite consensus disorder prediction 10 27 - -
Gso17g1734 492 SUPERFAMILY ARM repeat 83 474 IPR016024 -
Gso17g1734 492 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso17g1734 492 PIRSF PP2A_B56 4 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso17g1734 492 Gene3D - 77 477 IPR011989 -
Gso17g1734 492 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 72 478 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1734 Gso-Chr17 33533173 33536928 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1734 K11584 - gmx:100806230 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1046 14 17623394 17627065 Gso17g1734 17 33533173 33536928 GST
Gso17g1734 17 33533173 33536928 Gso4g0613 4 5937197 5940476 PCT
Gso17g1734 17 33533173 33536928 Gso6g0611 6 5679046 5682484 PCT
Gso4g0613 4 5937197 5940476 Gso17g1734 17 33533173 33536928 PCT
Gso6g0611 6 5679046 5682484 Gso17g1734 17 33533173 33536928 PCT