Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0613 ATGCTCAAGCAATTCCTCAGCAAACTCCCTCGCAAGGCACCCAAACCCGACTCGGACGAGTCATGCCGAGCCGACTCGTCGCGCTCGGACGATTCCCCACGCGCCGCCAGCAGAAACATCCGCCCTCCCGGCGGCGGAGGCTCCTCCGCCGCGAAGAAAACATCCTCGTCGGCGGTTTTTCCGGCGAGCACGGTGTCGTTGATTGAACCTTTGGTTCCTTTTAAGGATGTTCCGAGTTCAGAGAAGATGAACCTTTTCGTGAGCAAGCTGAGCCTGTGTTGCGTCACGTTCGATTTCACGGACCCTGGTAAGAACACGGTGGAAAAAGAGGTGAAGAGAAGAACCCTCGTTGAGCTCGTTGATTTTGTGTCCTCTTGTGGGTCCTCGAGGTTCAGTGAACCTGCTATTCTTGCTGTTTGCAGAATGTGTGCTATTAATCTCTTTCGCGTTTTCCCGCCAAATTACAGGTCCAATCGTGGTGGTGAGAATGATGATGATGAGCCAGCGTTTGATCCCGCTTGGCCTCATTTGCAGCTGGTGTATGAGTTGCTGCTTAAGTTTATAACCTCAAATTGTCTCGATGCTAAGGTGGCTAAGAAGTACATTGACCATTCGTTTATTTTAAGGTTGTTGGAGTTGTTTGATTCGGAGGATCCTAGGGAGAGGGACTGCTTGAAGACGATTCTGCATAGGGTTTATGGCAAGTTCATGGTGCATAGGCCCTACATAAGGAAATCAATTAACAACTTGTTCTATAACTTTGTGTTTGAGACCGAGAGGCACAATGGGATTGCGGAGTTGTTGGAGATTTTTGGGAGCATAATTAGCGGGTTTGCTTTGCCTTTGAAGGAGGAGCACAAGATCTTCTTGTGGAGGGTTTTGATTCCCTTGCACAAGCCCAAGTCTATTGGGGTGTACTTCCAGCAGTTGTCTTATTGCGTTACACAGTTTATAGAGAAAGAGCCCAAGTTGGCAAGCATTGTGATAAGGGGGATGTTGAAGTATTGGCCGATAACGAACAGTCAGAAAGAGGTGATGTTCCTGGGTGAACTGGAGGAAATTTTGGAAACAATTAACATGGTAGAGTTTCAGAGGGTCATGGTCCCGTTGTTTTGGCGGATTGGATGCTGCATTAACAGTTTGCACTTCCAGGTAGCTGAAAGAGCCCTTTTCTTATGGAACAACGACCATATTGTCAACTTGATTGCTCACAACCGACAAGTGATCCTGCCAATCATATTTCCAGCCTTAGAGAAGAATTCTCAGGGCCACTGGAGCCAGTCAGTGCTCAACCTAACTTATAACGTGAGAAAAATGTTTGTAGAGATGGATGAGAAGCTGTTCCTGGCTTCTCATTCTCAATTCAAGGAAGAAGAAGTAATGCTAAACATGGCGGCAGAGAAGCGGAAGGAAGCGTGGAAACAACTCGAGCATGCAGCCAGTCTCCAGCCTGCGATTGGAAATACCCCAGTTTTAGTATCTCCAATTTGA 1491 0.4755 MLKQFLSKLPRKAPKPDSDESCRADSSRSDDSPRAASRNIRPPGGGGSSAAKKTSSSAVFPASTVSLIEPLVPFKDVPSSEKMNLFVSKLSLCCVTFDFTDPGKNTVEKEVKRRTLVELVDFVSSCGSSRFSEPAILAVCRMCAINLFRVFPPNYRSNRGGENDDDEPAFDPAWPHLQLVYELLLKFITSNCLDAKVAKKYIDHSFILRLLELFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSINNLFYNFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSIGVYFQQLSYCVTQFIEKEPKLASIVIRGMLKYWPITNSQKEVMFLGELEEILETINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALEKNSQGHWSQSVLNLTYNVRKMFVEMDEKLFLASHSQFKEEEVMLNMAAEKRKEAWKQLEHAASLQPAIGNTPVLVSPI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0613 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 494 - -
Gso4g0613 496 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 73 480 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso4g0613 496 PIRSF PP2A_B56 4 493 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso4g0613 496 SUPERFAMILY ARM repeat 84 476 IPR016024 -
Gso4g0613 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso4g0613 496 MobiDBLite consensus disorder prediction 1 55 - -
Gso4g0613 496 MobiDBLite consensus disorder prediction 10 35 - -
Gso4g0613 496 Gene3D - 78 479 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0613 Gso-Chr4 5937197 5940476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0613 K11584 - gmx:100775273 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0613 4 5937197 5940476 Gso6g0611 6 5679046 5682484 GST
Gso14g1046 14 17623394 17627065 Gso4g0613 4 5937197 5940476 PCT
Gso17g1734 17 33533173 33536928 Gso4g0613 4 5937197 5940476 PCT
Gso4g0613 4 5937197 5940476 Gso14g1046 14 17623394 17627065 PCT
Gso4g0613 4 5937197 5940476 Gso17g1734 17 33533173 33536928 PCT