Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0582 ATGGGTAGAAGGGGAATCCAACTGTTTGATGAGAAAAGAGATGTTTTTTTCTCTGTCTGCAATTTGGGGTTTGAATCCAAGGATGGCTACCATCAATTCGGAGGTTTGTTTGCCAGTGTTGGTCAAATGGGAATGGGGGTTGGCGTGCAACCTAACGACCCTTCTGACTCGCGTAACAATGGTGGCATGAAATTTCCCTTAAACGAATTGTTCCTCAAGCATGTTCAATCTCAGGGGAAGGAAGAGGCTGTTGAGGAAGGAGTTAAGGGGAAGAAGAATAAAAAGGGTGGTGGTGTTTCACTCAAGCTTAAGATCAGGAACCCTTCACTGAGGAGGTTGTTTAGTGGGGCAGTTGCCGGGACCGTGTCTCGGACCGCCGTGGCGCCTTTGGAGACTATAAGGACTCTCTTGATGGTGGGGAGTAGTGGCCATTCCACCACTGAGGTGTTCAACAATATTATGAAAACTGATGGCTGGAAGGGATTGTTTAGGGGTAATTTTGTTAATGTCATTCGGGTTGCGCCTAGCAAGGCCATTGAGCTATTTGCTTTTGATACAGTAAACAAGAACCTATCCCCAAAGCCTGGGGAGCAGTCCAAAATCCCAATTCCTGCCTCATTGATTGCAGGTGCCTGTGCTGGAGTCAGTTCCACTATATGTACATATCCACTTGAATTAGTCAAGACTCGACTAACTGTCCAGAGCGATGTTTATCATGGTCTGCTTCATGCATTCGTGAAAATAATTCGAGAAGAGGGTCCTGCTCAACTTTATAGAGGCCTCGCAGCTAGTCTTATTGGAGTTGTCCCATATGCTGCTACCAATTACTATGCCTACGACACTTTAAGGAAAGCATACCAGAAATTTTCTAAACAAAAGAAGGTCGGCAACATTGAAACCCTTTTGATTGGTTCAGCAGCTGGTGCTTTTTCAAGTAGTGCAACTTTTCCACTTGAGGTGGCTCGCAAGCAGATGCAACTTGGAGCTCTCAGTGGAAGGCAGGTATACAAGGATGTGTTTCATGCCCTTGCATGCATATTTGAACAAGAAGGGTTCCATGGTTTATATAGAGGGCTGGCACCTAGTTGCATGAAGTTGGTACCAGCTGCTGGAATCTCTTTCATGTGCTACGAAGCATGCAAGAGGATATTGCTAGAAAACGATGAGGAGGATTAG 1176 0.4558 MGRRGIQLFDEKRDVFFSVCNLGFESKDGYHQFGGLFASVGQMGMGVGVQPNDPSDSRNNGGMKFPLNELFLKHVQSQGKEEAVEEGVKGKKNKKGGGVSLKLKIRNPSLRRLFSGAVAGTVSRTAVAPLETIRTLLMVGSSGHSTTEVFNNIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAFDTVNKNLSPKPGEQSKIPIPASLIAGACAGVSSTICTYPLELVKTRLTVQSDVYHGLLHAFVKIIREEGPAQLYRGLAASLIGVVPYAATNYYAYDTLRKAYQKFSKQKKVGNIETLLIGSAAGAFSSSATFPLEVARKQMQLGALSGRQVYKDVFHALACIFEQEGFHGLYRGLAPSCMKLVPAAGISFMCYEACKRILLENDEED* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0582 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 201 285 IPR018108 -
Gso6g0582 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 295 383 IPR018108 -
Gso6g0582 391 PRINTS Mitochondrial carrier protein signature 112 125 IPR002067 GO:0055085
Gso6g0582 391 PRINTS Mitochondrial carrier protein signature 125 139 IPR002067 GO:0055085
Gso6g0582 391 PRINTS Mitochondrial carrier protein signature 165 185 IPR002067 GO:0055085
Gso6g0582 391 PRINTS Mitochondrial carrier protein signature 216 234 IPR002067 GO:0055085
Gso6g0582 391 PRINTS Mitochondrial carrier protein signature 258 276 IPR002067 GO:0055085
Gso6g0582 391 PRINTS Mitochondrial carrier protein signature 304 326 IPR002067 GO:0055085
Gso6g0582 391 SUPERFAMILY Mitochondrial carrier 108 379 IPR023395 -
Gso6g0582 391 PANTHER ADENINE NUCLEOTIDE TRANSPORTER BT1, CHLOROPLASTIC/MITOCHONDRIAL 30 390 - -
Gso6g0582 391 PANTHER SOLUTE CARRIER FAMILY 25 30 390 - -
Gso6g0582 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 190 IPR018108 -
Gso6g0582 391 Pfam Mitochondrial carrier protein 295 387 IPR018108 -
Gso6g0582 391 Pfam Mitochondrial carrier protein 109 191 IPR018108 -
Gso6g0582 391 Pfam Mitochondrial carrier protein 200 288 IPR018108 -
Gso6g0582 391 Gene3D Mitochondrial carrier domain 105 389 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0582 Gso-Chr6 5390892 5395540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0582 1 390 Organic Solute Cotransporters AT4G32400 67.430 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0582 K14684 - gmx:100797663 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0583 4 5648785 5653411 Gso6g0582 6 5390892 5395540 GST
Gso14g1013 14 14868817 14872167 Gso6g0582 6 5390892 5395540 PCT
Gso17g1782 17 34821000 34824736 Gso6g0582 6 5390892 5395540 PCT
Gso6g0582 6 5390892 5395540 Gso14g1013 14 14868817 14872167 PCT
Gso6g0582 6 5390892 5395540 Gso17g1782 17 34821000 34824736 PCT