Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1013 ATGGGCAGGAGAGGGGTCAAGCTATTCGATGAAGAAAAGAACGGTCTTTTTTCAATTTCCAATTTTGGGTCTCAATGGGGTGGTGGTGGTGTTCACGACCCTGTGAATTTGGCTGTGATGGCAAGCATTAGTCGAATGGGAATGGGGTTTGGTGTTCAACAACCAAACCCTTCTTCTTCTGATGATAATAATTCCCAGCACAACGGTGGCATGAGCATGAGTATGAGGATTCCGTGCACCGAGTTGTACGTTCGGTACGTGCAATCCGAGGGGAAGGTGAAGATTCTGGGGGTTCCTGAGGAGGAAGAGGTGGTGGAGGGGGTGAAAAAGAAGAAAAAGGGTGGTGCCTTTAAAGGGTTGAGGATTAAGGTGAAGAACCCTTCTCTTAGGAGGTTGGTTAGCGGTGCCTTTGCTGGGGCGGTTTCACGGACCACTGTGGCGCCCTTGGAGACGATAAGGACTCATTTGATGGTGGGGGGTAGTGGCAATTCCACTGGGGAGGTGTTCAGGAATATCATGAAGACTGATGGGTGGAAGGGCTTGTTTAGGGGTAATTTCGTTAATGTGATTCGGGTTGCTCCTGGCAAGGCCATTGAGCTATTTGCTTATGATACTGTTAACAAGAACCTCTCGCCAAAGCCAGGGGAGCAGCCCAAACTCCCTATTCCAGCATCATTGATAGCAGGTGCTTGTGCTGGAGTTAGTTCAACTATATGCACTTATCCTCTAGAGTTACTAAAGACTCGACTAACTATCCAGAGGGGTGTTTATGATGGTCTTGTAGATGCATTCCTGAAAATAGTTAGAGAGGAAGGTGCAGGAGAACTTTACAGAGGCCTTACTCCGAGTCTGATTGGAGTAATTCCATATTCTGCCACCAATTACTTTGCCTATGACACCTTGAGGAAAGCATACAGAAAAATTTTCAAGAAAGAGAAGATTGGCAACATTGAAACCCTTTTGATAGGATCAGCAGCTGGTGCTATTTCAAGTAGTGCTACCTTTCCGCTCGAAGTGGCTCGCAAACACATGCAAGTGGGAGCCCTTAGTGGAAGACAAGTATACAAAAATGTGATTCATGCCCTTGCAAGCATTCTTGAACAAGAAGGAATCCAAGGATTGTATAAAGGGTTGGGACCTAGCTGCATGAAGTTGGTGCCAGCTGCAGGAATTTCTTTCATGTGCTATGAAGCATGCAAGAGGATACTAGTAGAGGACGACGATGATGAGGAGTGA 1236 0.466 MGRRGVKLFDEEKNGLFSISNFGSQWGGGGVHDPVNLAVMASISRMGMGFGVQQPNPSSSDDNNSQHNGGMSMSMRIPCTELYVRYVQSEGKVKILGVPEEEEVVEGVKKKKKGGAFKGLRIKVKNPSLRRLVSGAFAGAVSRTTVAPLETIRTHLMVGGSGNSTGEVFRNIMKTDGWKGLFRGNFVNVIRVAPGKAIELFAYDTVNKNLSPKPGEQPKLPIPASLIAGACAGVSSTICTYPLELLKTRLTIQRGVYDGLVDAFLKIVREEGAGELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKKEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVIHALASILEQEGIQGLYKGLGPSCMKLVPAAGISFMCYEACKRILVEDDDDEE* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1013 411 ProSiteProfiles Solute carrier (Solcar) repeat profile. 314 402 IPR018108 -
Gso14g1013 411 Gene3D Mitochondrial carrier domain 123 408 IPR023395 -
Gso14g1013 411 MobiDBLite consensus disorder prediction 50 72 - -
Gso14g1013 411 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 304 IPR018108 -
Gso14g1013 411 Pfam Mitochondrial carrier protein 127 210 IPR018108 -
Gso14g1013 411 Pfam Mitochondrial carrier protein 220 307 IPR018108 -
Gso14g1013 411 Pfam Mitochondrial carrier protein 314 405 IPR018108 -
Gso14g1013 411 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 209 IPR018108 -
Gso14g1013 411 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 28 408 - -
Gso14g1013 411 SUPERFAMILY Mitochondrial carrier 127 398 IPR023395 -
Gso14g1013 411 PRINTS Mitochondrial carrier protein signature 131 144 IPR002067 GO:0055085
Gso14g1013 411 PRINTS Mitochondrial carrier protein signature 144 158 IPR002067 GO:0055085
Gso14g1013 411 PRINTS Mitochondrial carrier protein signature 184 204 IPR002067 GO:0055085
Gso14g1013 411 PRINTS Mitochondrial carrier protein signature 235 253 IPR002067 GO:0055085
Gso14g1013 411 PRINTS Mitochondrial carrier protein signature 277 295 IPR002067 GO:0055085
Gso14g1013 411 PRINTS Mitochondrial carrier protein signature 323 345 IPR002067 GO:0055085
Gso14g1013 411 PANTHER SOLUTE CARRIER FAMILY 25 28 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1013 Gso-Chr14 14868817 14872167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1013 1 409 Organic Solute Cotransporters AT4G32400 62.651 3.11e-176 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1013 K14684 - gmx:100816041 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1013 14 14868817 14872167 Gso14g1013 14 14868817 14872167 ECH
Gso14g1013 14 14868817 14872167 Gso17g1782 17 34821000 34824736 GST
Gso14g1013 14 14868817 14872167 Gso4g0583 4 5648785 5653411 PCT
Gso14g1013 14 14868817 14872167 Gso6g0582 6 5390892 5395540 PCT
Gso4g0583 4 5648785 5653411 Gso14g1013 14 14868817 14872167 PCT
Gso6g0582 6 5390892 5395540 Gso14g1013 14 14868817 14872167 PCT