Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1782 ATGGGTAGGAGAGGAATCAAGCTATTCGATGAAGAAAGGAACGGTCTTTTTTCAATTTCCAATTTTGGGTCTCAATGGGGTGGTGTTAGAGGTGATGGTGTTCAAGACCCTGTGAATTTGGCTGTGTATGCAAGCATTAGTCAAATGGGAATGGGGTTTGGTGTTCAAGAACCAAACCCTTCTTCTTCTTCTTCTGATGGTGATAATTCCCAACACAACGGTGGCATGAGCATGAGAATGAGGATTCCGTGCACCGAGTTGTACGTTCGGTACGTGCAATCCGAGGGGAAGGTGAAGATTCTGGGGGTTCCTGAGGAGGAGGAGGAAGAGGTGGTGAAGGGGGTGAAGAAAAAGAAAAAAGGGGGTGTCTTTAGAGGGTTGAGGATTAAGGTGAAGAACTCTTCTCTTAGGAGGTTGGTTAGTGGTGCCTTTGCTGGGGCGGTTTCACGGACCACTGTGGCACCTTTGGAGACCATAAGGACTCATTTGATGGTCGGAAGTAGTGGCAGTTCCACTGGGGAGGTCTTCAGGAACATCATGGAGACTGATGGATGGAAGGGCTTGTTTAGGGGTAATTTCGTCAATGTGATTCGAGTTGCTCCTAGCAAGGCCATTGAGCTATTAGCTTATGAAACTGTTAACAAGAACCTCTCACCAAAGCCAGGGGAGCATTCCAAACTCCCTATTCCAGCATCATTGATAGCAGGTGCTTGTGCTGGAGTTTGTTCAACTATATGCACATATCCTCTAGAGTTGCTAAAGACTCGACTAACTATCCAGAGGGGTGTTTATGATGGTCTACTAGATGCATTCCTGAAAATAGTTAGAGAAGAGGGTGCAGGAGAACTTTACAGAGGTCTTACTCCGAGTCTGATTGGAGTAATTCCATATTCTGCCACCAATTACTTTGCCTATGACACCTTGAGGAAAGCATACAGAAAAATTTTCAAAAAAGAGAAGATTGGCAACATTGAAACCCTTTTGATAGGATCAGCAGCTGGTGCATTTTCAAGTAGTGCTACCTTTCCACTCGAAGTGGCTCGCAAACACATGCAAGTGGGAGCCCTCAGTGGAAGGCAAGTTTACAAAAATGTGATTCATGCCCTTGCAAGCATTCTTGAGCAAGAAGGGATCCAAGGATTATATAAAGGGTTGGGACCTAGCTGCATGAAGTTGGTGCCAGCTGCAGGAATTTCTTTCATGTGCTATGAAGCATGCAAGAGGATATTGGTAGAGGATGATGATGATGAGGAGTAG 1257 0.4543 MGRRGIKLFDEERNGLFSISNFGSQWGGVRGDGVQDPVNLAVYASISQMGMGFGVQEPNPSSSSSDGDNSQHNGGMSMRMRIPCTELYVRYVQSEGKVKILGVPEEEEEEVVKGVKKKKKGGVFRGLRIKVKNSSLRRLVSGAFAGAVSRTTVAPLETIRTHLMVGSSGSSTGEVFRNIMETDGWKGLFRGNFVNVIRVAPSKAIELLAYETVNKNLSPKPGEHSKLPIPASLIAGACAGVCSTICTYPLELLKTRLTIQRGVYDGLLDAFLKIVREEGAGELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKKEKIGNIETLLIGSAAGAFSSSATFPLEVARKHMQVGALSGRQVYKNVIHALASILEQEGIQGLYKGLGPSCMKLVPAAGISFMCYEACKRILVEDDDDEE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1782 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 321 409 IPR018108 -
Gso17g1782 418 MobiDBLite consensus disorder prediction 53 76 - -
Gso17g1782 418 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 31 415 - -
Gso17g1782 418 PANTHER SOLUTE CARRIER FAMILY 25 31 415 - -
Gso17g1782 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 133 216 IPR018108 -
Gso17g1782 418 Pfam Mitochondrial carrier protein 134 217 IPR018108 -
Gso17g1782 418 Pfam Mitochondrial carrier protein 321 412 IPR018108 -
Gso17g1782 418 Pfam Mitochondrial carrier protein 226 314 IPR018108 -
Gso17g1782 418 PRINTS Mitochondrial carrier protein signature 138 151 IPR002067 GO:0055085
Gso17g1782 418 PRINTS Mitochondrial carrier protein signature 151 165 IPR002067 GO:0055085
Gso17g1782 418 PRINTS Mitochondrial carrier protein signature 191 211 IPR002067 GO:0055085
Gso17g1782 418 PRINTS Mitochondrial carrier protein signature 242 260 IPR002067 GO:0055085
Gso17g1782 418 PRINTS Mitochondrial carrier protein signature 284 302 IPR002067 GO:0055085
Gso17g1782 418 PRINTS Mitochondrial carrier protein signature 330 352 IPR002067 GO:0055085
Gso17g1782 418 SUPERFAMILY Mitochondrial carrier 134 405 IPR023395 -
Gso17g1782 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 311 IPR018108 -
Gso17g1782 418 Gene3D Mitochondrial carrier domain 129 415 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1782 Gso-Chr17 34821000 34824736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1782 1 416 Organic Solute Cotransporters AT4G32400 60.671 2.75e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1782 K14684 - gmx:100816041 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1013 14 14868817 14872167 Gso17g1782 17 34821000 34824736 GST
Gso17g1782 17 34821000 34824736 Gso4g0583 4 5648785 5653411 PCT
Gso17g1782 17 34821000 34824736 Gso6g0582 6 5390892 5395540 PCT
Gso4g0583 4 5648785 5653411 Gso17g1782 17 34821000 34824736 PCT
Gso6g0582 6 5390892 5395540 Gso17g1782 17 34821000 34824736 PCT